Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SNX3P1X-201ENST00000414887 175 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 MTATP6P29-201ENST00000415057 132 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 RNA5SP147-201ENST00000516493 109 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 YWHAEP3-201ENST00000582767 121 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 MIR4719-201ENST00000585233 84 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 AC006254.2-201ENST00000603259 279 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 MIR4773-1-201ENST00000637203 78 ntBASIC-1.1□□□□□ -2.59
CCNA1P78396 snoU13.17-201ENST00000458802 104 ntBASIC-1.11□□□□□ -2.59
CCNA1P78396 MIR203A-201ENST00000384836 110 ntBASIC-1.12□□□□□ -2.59
CCNA1P78396 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.12□□□□□ -2.59
CCNA1P78396 RNU6-346P-201ENST00000516288 111 ntBASIC-1.12□□□□□ -2.59
CCNA1P78396 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.12□□□□□ -2.59
CCNA1P78396 AL353803.5-201ENST00000599815 141 ntBASIC-1.12□□□□□ -2.59
CCNA1P78396 RNU6-824P-201ENST00000363724 104 ntBASIC-1.13□□□□□ -2.59
CCNA1P78396 SNORD114-17-201ENST00000364699 75 ntBASIC-1.13□□□□□ -2.59
CCNA1P78396 SNORA19.1-201ENST00000410656 129 ntBASIC-1.13□□□□□ -2.59
CCNA1P78396 U6.95-201ENST00000636931 70 ntBASIC-1.13□□□□□ -2.59
CCNA1P78396 RNU6-431P-201ENST00000383874 107 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 SNORD64-201ENST00000386683 67 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.14□□□□□ -2.59
CCNA1P78396 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 RNU6-706P-201ENST00000517229 104 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 AC140658.3-201ENST00000567603 271 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 MIR4464-201ENST00000580818 92 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 MIR6509-201ENST00000614603 85 ntBASIC-1.14□□□□□ -2.59
CCNA1P78396 SNORA33.1-201ENST00000364957 130 ntBASIC-1.15□□□□□ -2.59
CCNA1P78396 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.15□□□□□ -2.59
CCNA1P78396 RNU6-260P-201ENST00000384092 107 ntBASIC-1.15□□□□□ -2.59
CCNA1P78396 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.15□□□□□ -2.59
CCNA1P78396 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.15□□□□□ -2.59
CCNA1P78396 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 RNU6-80P-201ENST00000384195 107 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 MIR601-201ENST00000385256 79 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 RNU6-887P-201ENST00000410660 100 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 RNA5SP180-201ENST00000516181 101 ntBASIC-1.16□□□□□ -2.6
CCNA1P78396 SNORA2.1-201ENST00000363089 137 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 SNORD58A-201ENST00000383875 65 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 MIR147A-201ENST00000385079 72 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 RNU6-972P-201ENST00000391208 107 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 MIR3657-201ENST00000584818 117 ntBASIC-1.17□□□□□ -2.6
CCNA1P78396 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 MIR1255B2-201ENST00000408618 67 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 AL691482.2-201ENST00000457453 84 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 SCARNA23-201ENST00000516060 130 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 RNU6-659P-201ENST00000516454 104 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 RNU6-255P-201ENST00000516957 105 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 AC026421.1-201ENST00000519101 163 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 AL445584.3-201ENST00000617173 78 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 MIR6888-201ENST00000621977 67 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 MIR198-201ENST00000637333 62 ntBASIC-1.18□□□□□ -2.6
CCNA1P78396 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 RNU6-880P-201ENST00000384526 107 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 MIR382-201ENST00000637119 76 ntBASIC-1.19□□□□□ -2.6
CCNA1P78396 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.2□□□□□ -2.6
CCNA1P78396 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.2□□□□□ -2.6
CCNA1P78396 RNU6-904P-201ENST00000516206 101 ntBASIC-1.2□□□□□ -2.6
CCNA1P78396 MIR4796-201ENST00000580742 81 ntBASIC-1.2□□□□□ -2.6
CCNA1P78396 U6.81-201ENST00000612550 106 ntBASIC-1.2□□□□□ -2.6
CCNA1P78396 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.21□□□□□ -2.6
CCNA1P78396 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.21□□□□□ -2.6
CCNA1P78396 RNY1P5-201ENST00000383890 115 ntBASIC-1.21□□□□□ -2.6
CCNA1P78396 MIR1285-2-201ENST00000408311 88 ntBASIC-1.21□□□□□ -2.6
CCNA1P78396 snoU83B.1-201ENST00000517136 88 ntBASIC-1.21□□□□□ -2.6
CCNA1P78396 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.22□□□□□ -2.6
CCNA1P78396 SNORD116-10-201ENST00000363791 102 ntBASIC-1.22□□□□□ -2.6
CCNA1P78396 MIR1468-201ENST00000410600 86 ntBASIC-1.22□□□□□ -2.6
CCNA1P78396 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.22□□□□□ -2.6
CCNA1P78396 RNU6-412P-201ENST00000516434 106 ntBASIC-1.22□□□□□ -2.6
CCNA1P78396 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.23□□□□□ -2.61
CCNA1P78396 SNORD116-21-201ENST00000384507 92 ntBASIC-1.23□□□□□ -2.61
CCNA1P78396 HLA-S-202ENST00000425174 53 ntBASIC-1.23□□□□□ -2.61
CCNA1P78396 RNU6-158P-201ENST00000517104 100 ntBASIC-1.23□□□□□ -2.61
CCNA1P78396 CYP3A54P-201ENST00000566950 75 ntBASIC-1.23□□□□□ -2.61
CCNA1P78396 RNU6-907P-201ENST00000390924 102 ntBASIC-1.24□□□□□ -2.61
CCNA1P78396 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.24□□□□□ -2.61
CCNA1P78396 RNU7-61P-201ENST00000515897 61 ntBASIC-1.24□□□□□ -2.61
CCNA1P78396 AC138207.3-201ENST00000585289 166 ntBASIC-1.24□□□□□ -2.61
CCNA1P78396 MIR365A-201ENST00000362260 87 ntBASIC-1.25□□□□□ -2.61
CCNA1P78396 AC090425.1-201ENST00000610007 140 ntBASIC-1.25□□□□□ -2.61
CCNA1P78396 MIR1246-201ENST00000636535 73 ntBASIC-1.25□□□□□ -2.61
CCNA1P78396 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.25□□□□□ -2.61
CCNA1P78396 RNU6-226P-201ENST00000363778 107 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 SNORD116-14-201ENST00000383894 92 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 SNORD116-17-201ENST00000383929 92 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 SNORD116-15-201ENST00000384445 92 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 SNORD116-19-201ENST00000384729 92 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 MIR4441-201ENST00000582623 100 ntBASIC-1.26□□□□□ -2.61
CCNA1P78396 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms