Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RNU6-431P-201ENST00000383874 107 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR517B-201ENST00000385102 67 ntBASIC-0.62□□□□□ -2.51
VCPP55072 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.62□□□□□ -2.51
VCPP55072 SCARNA23-201ENST00000516060 130 ntBASIC-0.62□□□□□ -2.51
VCPP55072 RNU6-881P-201ENST00000516813 102 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR4324-201ENST00000584846 72 ntBASIC-0.62□□□□□ -2.51
VCPP55072 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
VCPP55072 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.63□□□□□ -2.51
VCPP55072 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.63□□□□□ -2.51
VCPP55072 SNORA19.1-201ENST00000410656 129 ntBASIC-0.63□□□□□ -2.51
VCPP55072 RNU6-904P-201ENST00000516206 101 ntBASIC-0.63□□□□□ -2.51
VCPP55072 MIR6854-201ENST00000614935 69 ntBASIC-0.63□□□□□ -2.51
VCPP55072 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.63□□□□□ -2.51
VCPP55072 RNY4P27-201ENST00000363341 96 ntBASIC-0.64□□□□□ -2.51
VCPP55072 SNORD114-25-201ENST00000363742 72 ntBASIC-0.64□□□□□ -2.51
VCPP55072 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.64□□□□□ -2.51
VCPP55072 MIR204-201ENST00000385200 110 ntBASIC-0.64□□□□□ -2.51
VCPP55072 RNU6-972P-201ENST00000391208 107 ntBASIC-0.64□□□□□ -2.51
VCPP55072 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.64□□□□□ -2.51
VCPP55072 AP000533.3-201ENST00000447704 118 ntBASIC-0.64□□□□□ -2.51
VCPP55072 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.64□□□□□ -2.51
VCPP55072 snoU13.17-201ENST00000458802 104 ntBASIC-0.64□□□□□ -2.51
VCPP55072 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.64□□□□□ -2.51
VCPP55072 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.64□□□□□ -2.51
VCPP55072 MIR4441-201ENST00000582623 100 ntBASIC-0.64□□□□□ -2.51
VCPP55072 MIR518B-201ENST00000385127 83 ntBASIC-0.65□□□□□ -2.51
VCPP55072 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
VCPP55072 RNA5SP461-201ENST00000516451 104 ntBASIC-0.65□□□□□ -2.51
VCPP55072 RNU6-824P-201ENST00000363724 104 ntBASIC-0.66□□□□□ -2.52
VCPP55072 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.66□□□□□ -2.52
VCPP55072 SNORA63.6-201ENST00000364921 119 ntBASIC-0.66□□□□□ -2.52
VCPP55072 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.66□□□□□ -2.52
VCPP55072 SNORD58A-201ENST00000383875 65 ntBASIC-0.66□□□□□ -2.52
VCPP55072 RNU6-959P-201ENST00000384671 107 ntBASIC-0.66□□□□□ -2.52
VCPP55072 RNU6-62P-201ENST00000516526 102 ntBASIC-0.66□□□□□ -2.52
VCPP55072 MIR6888-201ENST00000621977 67 ntBASIC-0.66□□□□□ -2.52
VCPP55072 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.67□□□□□ -2.52
VCPP55072 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.67□□□□□ -2.52
VCPP55072 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.67□□□□□ -2.52
VCPP55072 RNU6-382P-201ENST00000365181 106 ntBASIC-0.67□□□□□ -2.52
VCPP55072 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.67□□□□□ -2.52
VCPP55072 SNORD64-201ENST00000386683 67 ntBASIC-0.67□□□□□ -2.52
VCPP55072 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
VCPP55072 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.67□□□□□ -2.52
VCPP55072 MIR1285-2-201ENST00000408311 88 ntBASIC-0.67□□□□□ -2.52
VCPP55072 AC022137.1-201ENST00000483735 151 ntBASIC-0.67□□□□□ -2.52
VCPP55072 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.67□□□□□ -2.52
VCPP55072 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.68□□□□□ -2.52
VCPP55072 RNU6-887P-201ENST00000410660 100 ntBASIC-0.68□□□□□ -2.52
VCPP55072 AC008267.6-201ENST00000441664 139 ntBASIC-0.68□□□□□ -2.52
VCPP55072 SNORA18.5-201ENST00000516616 101 ntBASIC-0.68□□□□□ -2.52
VCPP55072 MIR548AG1-201ENST00000579932 66 ntBASIC-0.68□□□□□ -2.52
VCPP55072 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.68□□□□□ -2.52
VCPP55072 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.68□□□□□ -2.52
VCPP55072 MIR203A-201ENST00000384836 110 ntBASIC-0.69□□□□□ -2.52
VCPP55072 MIR124-2-201ENST00000385081 109 ntBASIC-0.69□□□□□ -2.52
VCPP55072 MIR1302-5-201ENST00000408164 150 ntBASIC-0.69□□□□□ -2.52
VCPP55072 SNORD75.2-201ENST00000408784 58 ntBASIC-0.69□□□□□ -2.52
VCPP55072 SNORA33.1-201ENST00000364957 130 ntBASIC-0.7□□□□□ -2.52
VCPP55072 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.7□□□□□ -2.52
VCPP55072 RNY1P7-201ENST00000384743 110 ntBASIC-0.7□□□□□ -2.52
VCPP55072 MIR147A-201ENST00000385079 72 ntBASIC-0.7□□□□□ -2.52
VCPP55072 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
VCPP55072 MTATP6P29-201ENST00000415057 132 ntBASIC-0.7□□□□□ -2.52
VCPP55072 RNU7-24P-201ENST00000458867 62 ntBASIC-0.7□□□□□ -2.52
VCPP55072 RNA5SP147-201ENST00000516493 109 ntBASIC-0.7□□□□□ -2.52
VCPP55072 YWHAEP3-201ENST00000582767 121 ntBASIC-0.7□□□□□ -2.52
VCPP55072 AL445584.3-201ENST00000617173 78 ntBASIC-0.7□□□□□ -2.52
VCPP55072 MT-TR-201ENST00000387439 65 ntBASIC-0.71□□□□□ -2.52
VCPP55072 AC021146.9-201ENST00000512503 156 ntBASIC-0.71□□□□□ -2.52
VCPP55072 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
VCPP55072 SCARNA17-201ENST00000516183 144 ntBASIC-0.71□□□□□ -2.52
VCPP55072 RNU6-158P-201ENST00000517104 100 ntBASIC-0.71□□□□□ -2.52
VCPP55072 RNU6-537P-201ENST00000517277 103 ntBASIC-0.71□□□□□ -2.52
VCPP55072 AC026421.1-201ENST00000519101 163 ntBASIC-0.71□□□□□ -2.52
VCPP55072 RNU6-81P-201ENST00000365608 104 ntBASIC-0.72□□□□□ -2.52
VCPP55072 AL353803.5-201ENST00000599815 141 ntBASIC-0.72□□□□□ -2.52
VCPP55072 MIR382-201ENST00000637119 76 ntBASIC-0.72□□□□□ -2.52
VCPP55072 RNU6-208P-201ENST00000362431 107 ntBASIC-0.73□□□□□ -2.53
VCPP55072 SNORD116-10-201ENST00000363791 102 ntBASIC-0.73□□□□□ -2.53
VCPP55072 MIR590-201ENST00000385008 97 ntBASIC-0.73□□□□□ -2.53
VCPP55072 SNORA13-201ENST00000458790 133 ntBASIC-0.73□□□□□ -2.53
VCPP55072 SNORD114-17-201ENST00000364699 75 ntBASIC-0.74□□□□□ -2.53
VCPP55072 SNORD74.6-201ENST00000364796 70 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNU6-260P-201ENST00000384092 107 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNU7-134P-201ENST00000458997 64 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNA5SP180-201ENST00000516181 101 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNU7-153P-201ENST00000516455 62 ntBASIC-0.74□□□□□ -2.53
VCPP55072 MIR3657-201ENST00000584818 117 ntBASIC-0.74□□□□□ -2.53
VCPP55072 MIR4499-201ENST00000584834 69 ntBASIC-0.74□□□□□ -2.53
VCPP55072 AL365222.1-201ENST00000614661 98 ntBASIC-0.74□□□□□ -2.53
VCPP55072 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.75□□□□□ -2.53
VCPP55072 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.75□□□□□ -2.53
VCPP55072 SCARNA18B-201ENST00000458806 135 ntBASIC-0.75□□□□□ -2.53
VCPP55072 U6.96-201ENST00000636425 70 ntBASIC-0.75□□□□□ -2.53
VCPP55072 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 1764.1 ms