Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MIR3681-201ENST00000580089 72 ntBASIC-0.63□□□□□ -2.51
NEK3P51956 MIR4796-201ENST00000580742 81 ntBASIC-0.63□□□□□ -2.51
NEK3P51956 MIR582-201ENST00000365731 98 ntBASIC-0.64□□□□□ -2.51
NEK3P51956 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.64□□□□□ -2.51
NEK3P51956 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.64□□□□□ -2.51
NEK3P51956 SNORA3B-201ENST00000391305 131 ntBASIC-0.64□□□□□ -2.51
NEK3P51956 RNU6-162P-201ENST00000516228 103 ntBASIC-0.64□□□□□ -2.51
NEK3P51956 SNORD114-14-201ENST00000362723 75 ntBASIC-0.65□□□□□ -2.51
NEK3P51956 SNORA63.6-201ENST00000364921 119 ntBASIC-0.65□□□□□ -2.51
NEK3P51956 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.65□□□□□ -2.51
NEK3P51956 HAR1A.1-201ENST00000459583 118 ntBASIC-0.65□□□□□ -2.51
NEK3P51956 SNORD114-15-201ENST00000364687 72 ntBASIC-0.66□□□□□ -2.52
NEK3P51956 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
NEK3P51956 AC145423.2-201ENST00000610631 239 ntBASIC-0.66□□□□□ -2.52
NEK3P51956 RNU7-55P-201ENST00000459426 62 ntBASIC-0.67□□□□□ -2.52
NEK3P51956 SNORA40.13-201ENST00000516379 120 ntBASIC-0.67□□□□□ -2.52
NEK3P51956 MIR4280-201ENST00000582178 76 ntBASIC-0.67□□□□□ -2.52
NEK3P51956 MIR450A1-201ENST00000362262 91 ntBASIC-0.68□□□□□ -2.52
NEK3P51956 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.68□□□□□ -2.52
NEK3P51956 SNORD56B-201ENST00000384713 71 ntBASIC-0.68□□□□□ -2.52
NEK3P51956 MIR548AI-201ENST00000579940 88 ntBASIC-0.68□□□□□ -2.52
NEK3P51956 AC093726.3-201ENST00000637588 150 ntBASIC-0.68□□□□□ -2.52
NEK3P51956 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.69□□□□□ -2.52
NEK3P51956 SNORD90-201ENST00000391145 111 ntBASIC-0.69□□□□□ -2.52
NEK3P51956 AP001318.4-201ENST00000616637 121 ntBASIC-0.69□□□□□ -2.52
NEK3P51956 SNORD95.1-201ENST00000364099 68 ntBASIC-0.7□□□□□ -2.52
NEK3P51956 MIR224-201ENST00000384889 81 ntBASIC-0.7□□□□□ -2.52
NEK3P51956 snoU13.19-201ENST00000459148 104 ntBASIC-0.7□□□□□ -2.52
NEK3P51956 RNU6-919P-201ENST00000516731 104 ntBASIC-0.7□□□□□ -2.52
NEK3P51956 RNU6-215P-201ENST00000365169 102 ntBASIC-0.71□□□□□ -2.52
NEK3P51956 RNU6-901P-201ENST00000384593 106 ntBASIC-0.71□□□□□ -2.52
NEK3P51956 AL445193.1-201ENST00000441183 141 ntBASIC-0.71□□□□□ -2.52
NEK3P51956 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.72□□□□□ -2.52
NEK3P51956 RNU6-382P-201ENST00000365181 106 ntBASIC-0.72□□□□□ -2.52
NEK3P51956 MIR519C-201ENST00000385053 87 ntBASIC-0.72□□□□□ -2.52
NEK3P51956 SNORD38.3-201ENST00000516599 73 ntBASIC-0.72□□□□□ -2.52
NEK3P51956 RNU6-502P-201ENST00000362419 108 ntBASIC-0.73□□□□□ -2.53
NEK3P51956 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.73□□□□□ -2.53
NEK3P51956 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 RNU6-32P-201ENST00000383948 107 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 RNU6-13P-201ENST00000384248 107 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 RNU6-12P-201ENST00000384604 107 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 RNU6-41P-201ENST00000384741 107 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 RNU6-274P-201ENST00000459566 107 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 U6.81-201ENST00000612550 106 ntBASIC-0.74□□□□□ -2.53
NEK3P51956 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.75□□□□□ -2.53
NEK3P51956 RNU6-973P-201ENST00000364690 107 ntBASIC-0.75□□□□□ -2.53
NEK3P51956 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.75□□□□□ -2.53
NEK3P51956 RNU6-721P-201ENST00000410155 105 ntBASIC-0.75□□□□□ -2.53
NEK3P51956 RNU6-824P-201ENST00000363724 104 ntBASIC-0.76□□□□□ -2.53
NEK3P51956 RNU6-592P-201ENST00000411333 103 ntBASIC-0.76□□□□□ -2.53
NEK3P51956 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.76□□□□□ -2.53
NEK3P51956 MIR6851-201ENST00000617060 67 ntBASIC-0.76□□□□□ -2.53
NEK3P51956 MIR4773-1-201ENST00000637203 78 ntBASIC-0.76□□□□□ -2.53
NEK3P51956 RNU6-633P-201ENST00000362612 103 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 SNORD115-37-201ENST00000363768 82 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 MIR204-201ENST00000385200 110 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 MIR196A1-201ENST00000388006 70 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 snoU13.17-201ENST00000458802 104 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 AC021146.9-201ENST00000512503 156 ntBASIC-0.77□□□□□ -2.53
NEK3P51956 RNU6-260P-201ENST00000384092 107 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 SNORD20-201ENST00000384550 80 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 AL450471.1-201ENST00000447509 127 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 snoU13.13-201ENST00000458842 104 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.78□□□□□ -2.53
NEK3P51956 AC021146.6-201ENST00000514659 117 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 RNU6-881P-201ENST00000516813 102 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 MIR4668-201ENST00000582284 70 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 MIR6773-201ENST00000612812 74 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 MALAT1.1-201ENST00000618249 95 ntBASIC-0.78□□□□□ -2.53
NEK3P51956 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.78□□□□□ -2.53
NEK3P51956 RNU6-990P-201ENST00000364385 104 ntBASIC-0.79□□□□□ -2.54
NEK3P51956 SNORD116-22-201ENST00000384430 92 ntBASIC-0.79□□□□□ -2.54
NEK3P51956 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
NEK3P51956 RNU6-752P-201ENST00000516376 102 ntBASIC-0.79□□□□□ -2.54
NEK3P51956 SNORD114-25-201ENST00000363742 72 ntBASIC-0.8□□□□□ -2.54
NEK3P51956 RNU4-63P-201ENST00000411313 118 ntBASIC-0.8□□□□□ -2.54
NEK3P51956 AL500527.2-201ENST00000454105 95 ntBASIC-0.8□□□□□ -2.54
NEK3P51956 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.8□□□□□ -2.54
NEK3P51956 SNORA2.1-201ENST00000363089 137 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 RNU6-681P-201ENST00000364012 104 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 AL691482.2-201ENST00000457453 84 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 RNU7-153P-201ENST00000516455 62 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 MIR6509-201ENST00000614603 85 ntBASIC-0.81□□□□□ -2.54
NEK3P51956 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.82□□□□□ -2.54
NEK3P51956 MIR5704-201ENST00000584029 77 ntBASIC-0.82□□□□□ -2.54
NEK3P51956 MIR8068-201ENST00000618032 68 ntBASIC-0.82□□□□□ -2.54
NEK3P51956 SNORD115-27-201ENST00000364430 82 ntBASIC-0.83□□□□□ -2.54
NEK3P51956 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.83□□□□□ -2.54
NEK3P51956 AL035461.1-201ENST00000421490 332 ntBASIC-0.83□□□□□ -2.54
NEK3P51956 snoR1.1-201ENST00000628177 80 ntBASIC-0.83□□□□□ -2.54
NEK3P51956 U2.22-201ENST00000636441 106 ntBASIC-0.83□□□□□ -2.54
NEK3P51956 RNU6-208P-201ENST00000362431 107 ntBASIC-0.84□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms