Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC006386.1-201ENST00000619436 415 ntBASIC-5.08□□□□□ -3.22
VCANP13611 SNORA25.5-201ENST00000363782 126 ntBASIC-5.09□□□□□ -3.22
VCANP13611 RNU6-358P-201ENST00000516564 75 ntBASIC-5.09□□□□□ -3.22
VCANP13611 SNORD115.1-201ENST00000391109 76 ntBASIC-5.11□□□□□ -3.23
VCANP13611 MIR517A-201ENST00000385001 87 ntBASIC-5.11□□□□□ -3.23
VCANP13611 SNORA63.4-201ENST00000362763 126 ntBASIC-5.12□□□□□ -3.23
VCANP13611 SNORD45B-201ENST00000364617 72 ntBASIC-5.12□□□□□ -3.23
VCANP13611 RNU6-298P-201ENST00000390888 96 ntBASIC-5.12□□□□□ -3.23
VCANP13611 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-5.12□□□□□ -3.23
VCANP13611 RNU6-624P-201ENST00000363411 107 ntBASIC-5.12□□□□□ -3.23
VCANP13611 RNU6-723P-201ENST00000383973 107 ntBASIC-5.12□□□□□ -3.23
VCANP13611 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-5.12□□□□□ -3.23
VCANP13611 MIR4789-201ENST00000577469 82 ntBASIC-5.13□□□□□ -3.23
VCANP13611 MIR4694-201ENST00000578534 80 ntBASIC-5.13□□□□□ -3.23
VCANP13611 AC068137.3-201ENST00000639191 341 ntBASIC-5.13□□□□□ -3.23
VCANP13611 Y_RNA.272-201ENST00000364696 102 ntBASIC-5.14□□□□□ -3.23
VCANP13611 RNU6-189P-201ENST00000516120 101 ntBASIC-5.14□□□□□ -3.23
VCANP13611 RNU6-894P-201ENST00000517094 105 ntBASIC-5.14□□□□□ -3.23
VCANP13611 MIR577-201ENST00000385196 96 ntBASIC-5.15□□□□□ -3.23
VCANP13611 MIR5583-1-201ENST00000580941 59 ntBASIC-5.15□□□□□ -3.23
VCANP13611 AC074348.1-201ENST00000426503 132 ntBASIC-5.15□□□□□ -3.23
VCANP13611 SNORD2.1-201ENST00000458762 69 ntBASIC-5.15□□□□□ -3.23
VCANP13611 RNU6-275P-201ENST00000364910 107 ntBASIC-5.15□□□□□ -3.23
VCANP13611 U6.112-201ENST00000384129 70 ntBASIC-5.15□□□□□ -3.23
VCANP13611 AL137067.1-201ENST00000615933 120 ntBASIC-5.15□□□□□ -3.23
VCANP13611 SNORD116-10-201ENST00000363791 102 ntBASIC-5.16□□□□□ -3.23
VCANP13611 SNORA19.2-201ENST00000516013 114 ntBASIC-5.16□□□□□ -3.23
VCANP13611 AC103810.7-201ENST00000607821 91 ntBASIC-5.16□□□□□ -3.23
VCANP13611 Y_RNA.590-201ENST00000410140 107 ntBASIC-5.16□□□□□ -3.24
VCANP13611 MTND1P19-201ENST00000511780 315 ntBASIC-5.17□□□□□ -3.24
VCANP13611 SNORD78.2-201ENST00000391076 69 ntBASIC-5.18□□□□□ -3.24
VCANP13611 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-5.19□□□□□ -3.24
VCANP13611 RNU6-59P-201ENST00000384787 107 ntBASIC-5.19□□□□□ -3.24
VCANP13611 RNU6-1220P-201ENST00000517126 108 ntBASIC-5.2□□□□□ -3.24
VCANP13611 RNU6-1103P-201ENST00000384150 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-813P-201ENST00000384691 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-1192P-201ENST00000612197 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-489P-201ENST00000618289 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-38P-201ENST00000384085 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-972P-201ENST00000391208 107 ntBASIC-5.21□□□□□ -3.24
VCANP13611 RNU6-508P-201ENST00000363231 103 ntBASIC-5.22□□□□□ -3.24
VCANP13611 RNU6-1091P-201ENST00000363945 107 ntBASIC-5.22□□□□□ -3.24
VCANP13611 MTND2P39-201ENST00000457230 764 ntBASIC-5.22□□□□□ -3.24
VCANP13611 Y_RNA.813-201ENST00000364639 102 ntBASIC-5.22□□□□□ -3.25
VCANP13611 RNU6-122P-201ENST00000516818 107 ntBASIC-5.22□□□□□ -3.25
VCANP13611 Y_RNA.152-201ENST00000363578 100 ntBASIC-5.23□□□□□ -3.25
VCANP13611 RNU4-33P-201ENST00000364316 85 ntBASIC-5.23□□□□□ -3.25
VCANP13611 SNORA20.3-201ENST00000516880 132 ntBASIC-5.23□□□□□ -3.25
VCANP13611 MIR1297-201ENST00000637311 77 ntBASIC-5.23□□□□□ -3.25
VCANP13611 AC112204.1-201ENST00000502591 103 ntBASIC-5.23□□□□□ -3.25
VCANP13611 RNU6-557P-201ENST00000516842 110 ntBASIC-5.23□□□□□ -3.25
VCANP13611 RNU6-1059P-201ENST00000363752 98 ntBASIC-5.24□□□□□ -3.25
VCANP13611 RNU6-510P-201ENST00000391239 108 ntBASIC-5.24□□□□□ -3.25
VCANP13611 MTND4P28-201ENST00000426217 387 ntBASIC-5.24□□□□□ -3.25
VCANP13611 RNU6-517P-201ENST00000384362 110 ntBASIC-5.24□□□□□ -3.25
VCANP13611 Y_RNA.609-201ENST00000410669 89 ntBASIC-5.24□□□□□ -3.25
VCANP13611 RNU6-74P-201ENST00000384235 107 ntBASIC-5.25□□□□□ -3.25
VCANP13611 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-5.25□□□□□ -3.25
VCANP13611 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-5.25□□□□□ -3.25
VCANP13611 Y_RNA.198-201ENST00000364013 98 ntBASIC-5.26□□□□□ -3.25
VCANP13611 SNORD116-24-201ENST00000384549 92 ntBASIC-5.26□□□□□ -3.25
VCANP13611 RNU6-818P-201ENST00000364837 108 ntBASIC-5.26□□□□□ -3.25
VCANP13611 AL731563.1-201ENST00000442202 214 ntBASIC-5.26□□□□□ -3.25
VCANP13611 RNU6-561P-201ENST00000516222 102 ntBASIC-5.26□□□□□ -3.25
VCANP13611 Y_RNA.720-201ENST00000517166 92 ntBASIC-5.26□□□□□ -3.25
VCANP13611 MIR1264-201ENST00000616374 69 ntBASIC-5.26□□□□□ -3.25
VCANP13611 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-5.27□□□□□ -3.25
VCANP13611 MTND1P29-201ENST00000448112 647 ntBASIC-5.27□□□□□ -3.25
VCANP13611 RNU6-294P-201ENST00000364999 102 ntBASIC-5.27□□□□□ -3.25
VCANP13611 RNU6-760P-201ENST00000516078 97 ntBASIC-5.27□□□□□ -3.25
VCANP13611 MIR154-201ENST00000385243 84 ntBASIC-5.28□□□□□ -3.25
VCANP13611 Y_RNA.213-201ENST00000364178 111 ntBASIC-5.29□□□□□ -3.26
VCANP13611 RNU6-686P-201ENST00000364839 107 ntBASIC-5.29□□□□□ -3.26
VCANP13611 AC016550.1-201ENST00000505348 785 ntBASIC-5.29□□□□□ -3.26
VCANP13611 MTND4P7-201ENST00000523876 130 ntBASIC-5.29□□□□□ -3.26
VCANP13611 CCDC34P1-201ENST00000507441 517 ntBASIC-5.29□□□□□ -3.26
VCANP13611 MTND4P24-201ENST00000424002 397 ntBASIC-5.3□□□□□ -3.26
VCANP13611 RNU4-43P-201ENST00000410628 137 ntBASIC-5.3□□□□□ -3.26
VCANP13611 MIR3613-201ENST00000579844 87 ntBASIC-5.3□□□□□ -3.26
VCANP13611 AL162413.1-201ENST00000603198 110 ntBASIC-5.31□□□□□ -3.26
VCANP13611 MIR664A-201ENST00000626086 82 ntBASIC-5.31□□□□□ -3.26
VCANP13611 SNORD115-48-201ENST00000364764 76 ntBASIC-5.31□□□□□ -3.26
VCANP13611 RNU6-787P-201ENST00000384032 107 ntBASIC-5.31□□□□□ -3.26
VCANP13611 Y_RNA.563-201ENST00000384707 108 ntBASIC-5.32□□□□□ -3.26
VCANP13611 MTND4LP14-201ENST00000429447 288 ntBASIC-5.32□□□□□ -3.26
VCANP13611 RNU6-1272P-201ENST00000362776 107 ntBASIC-5.33□□□□□ -3.26
VCANP13611 RNU6-1325P-201ENST00000364905 105 ntBASIC-5.33□□□□□ -3.26
VCANP13611 Y_RNA.532-201ENST00000384590 113 ntBASIC-5.33□□□□□ -3.26
VCANP13611 MIR519C-201ENST00000385053 87 ntBASIC-5.33□□□□□ -3.26
VCANP13611 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-5.33□□□□□ -3.26
VCANP13611 AL603755.1-201ENST00000619504 163 ntBASIC-5.33□□□□□ -3.26
VCANP13611 Y_RNA.462-201ENST00000384268 102 ntBASIC-5.34□□□□□ -3.26
VCANP13611 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-5.34□□□□□ -3.26
VCANP13611 RNU6-1156P-201ENST00000410365 100 ntBASIC-5.35□□□□□ -3.27
VCANP13611 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-5.36□□□□□ -3.27
VCANP13611 RNU7-180P-201ENST00000459240 63 ntBASIC-5.36□□□□□ -3.27
VCANP13611 SNORD63-201ENST00000384262 68 ntBASIC-5.36□□□□□ -3.27
VCANP13611 MIRLET7A1-201ENST00000362295 80 ntBASIC-5.36□□□□□ -3.27
VCANP13611 RNU6-1119P-201ENST00000384349 108 ntBASIC-5.36□□□□□ -3.27
VCANP13611 MIR3938-201ENST00000582157 103 ntBASIC-5.36□□□□□ -3.27
Retrieved 100 of 98,524 protein–RNA pairs in 248.5 ms