Protein–RNA interactions for Protein: O95716

RAB3D, Ras-related protein Rab-3D, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3DO95716 MIR3657-201ENST00000584818 117 ntBASIC-1.19□□□□□ -2.6
RAB3DO95716 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.2□□□□□ -2.6
RAB3DO95716 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.2□□□□□ -2.6
RAB3DO95716 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.2□□□□□ -2.6
RAB3DO95716 MIR1255B2-201ENST00000408618 67 ntBASIC-1.2□□□□□ -2.6
RAB3DO95716 AL445584.3-201ENST00000617173 78 ntBASIC-1.2□□□□□ -2.6
RAB3DO95716 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.21□□□□□ -2.6
RAB3DO95716 AL691482.2-201ENST00000457453 84 ntBASIC-1.21□□□□□ -2.6
RAB3DO95716 AC090425.1-201ENST00000610007 140 ntBASIC-1.21□□□□□ -2.6
RAB3DO95716 SNORA2.1-201ENST00000363089 137 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 SNORD116-21-201ENST00000384507 92 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 RNU6-880P-201ENST00000384526 107 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 CYP3A54P-201ENST00000566950 75 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.22□□□□□ -2.6
RAB3DO95716 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.23□□□□□ -2.61
RAB3DO95716 MIR548AX-201ENST00000580117 73 ntBASIC-1.23□□□□□ -2.61
RAB3DO95716 MIR4796-201ENST00000580742 81 ntBASIC-1.23□□□□□ -2.61
RAB3DO95716 uc_338.19-201ENST00000616808 99 ntBASIC-1.23□□□□□ -2.61
RAB3DO95716 MIR382-201ENST00000637119 76 ntBASIC-1.23□□□□□ -2.61
RAB3DO95716 RNU6-274P-201ENST00000459566 107 ntBASIC-1.24□□□□□ -2.61
RAB3DO95716 RNU6-412P-201ENST00000516434 106 ntBASIC-1.24□□□□□ -2.61
RAB3DO95716 AC140658.3-201ENST00000567603 271 ntBASIC-1.24□□□□□ -2.61
RAB3DO95716 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.24□□□□□ -2.61
RAB3DO95716 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.25□□□□□ -2.61
RAB3DO95716 RNU7-61P-201ENST00000515897 61 ntBASIC-1.25□□□□□ -2.61
RAB3DO95716 RNA5SP470-201ENST00000516463 106 ntBASIC-1.25□□□□□ -2.61
RAB3DO95716 MIR4499-201ENST00000584834 69 ntBASIC-1.25□□□□□ -2.61
RAB3DO95716 U6.81-201ENST00000612550 106 ntBASIC-1.25□□□□□ -2.61
RAB3DO95716 SNORD116-10-201ENST00000363791 102 ntBASIC-1.26□□□□□ -2.61
RAB3DO95716 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.26□□□□□ -2.61
RAB3DO95716 MIR590-201ENST00000385008 97 ntBASIC-1.26□□□□□ -2.61
RAB3DO95716 SNORD116-14-201ENST00000383894 92 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 SNORD116-17-201ENST00000383929 92 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 SNORD116-15-201ENST00000384445 92 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 SNORD116-19-201ENST00000384729 92 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 RNU6-162P-201ENST00000516228 103 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 RNU6-537P-201ENST00000517277 103 ntBASIC-1.27□□□□□ -2.61
RAB3DO95716 MIR7-2-201ENST00000384970 110 ntBASIC-1.28□□□□□ -2.61
RAB3DO95716 MIR1265-201ENST00000408444 86 ntBASIC-1.28□□□□□ -2.61
RAB3DO95716 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.28□□□□□ -2.61
RAB3DO95716 RNU7-153P-201ENST00000516455 62 ntBASIC-1.28□□□□□ -2.61
RAB3DO95716 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.29□□□□□ -2.62
RAB3DO95716 MIR1236-201ENST00000408340 102 ntBASIC-1.29□□□□□ -2.62
RAB3DO95716 RNA5SP25-201ENST00000410815 110 ntBASIC-1.29□□□□□ -2.62
RAB3DO95716 SCARNA18B-201ENST00000458806 135 ntBASIC-1.29□□□□□ -2.62
RAB3DO95716 snoU83B.1-201ENST00000517136 88 ntBASIC-1.29□□□□□ -2.62
RAB3DO95716 MIR521-2-201ENST00000384818 87 ntBASIC-1.3□□□□□ -2.62
RAB3DO95716 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.3□□□□□ -2.62
RAB3DO95716 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.3□□□□□ -2.62
RAB3DO95716 RNU6-109P-201ENST00000516364 107 ntBASIC-1.3□□□□□ -2.62
RAB3DO95716 RNU6-184P-201ENST00000516514 107 ntBASIC-1.3□□□□□ -2.62
RAB3DO95716 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.31□□□□□ -2.62
RAB3DO95716 MIR1302-5-201ENST00000408164 150 ntBASIC-1.31□□□□□ -2.62
RAB3DO95716 MIR4324-201ENST00000584846 72 ntBASIC-1.31□□□□□ -2.62
RAB3DO95716 RNU6-924P-201ENST00000362926 108 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 U7.3-201ENST00000616123 62 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 MIR6738-201ENST00000619620 64 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 MIR7111-201ENST00000619751 72 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.32□□□□□ -2.62
RAB3DO95716 RNU6-24P-201ENST00000384440 107 ntBASIC-1.33□□□□□ -2.62
RAB3DO95716 MIR519A2-201ENST00000384990 87 ntBASIC-1.33□□□□□ -2.62
RAB3DO95716 AL450471.1-201ENST00000447509 127 ntBASIC-1.33□□□□□ -2.62
RAB3DO95716 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.34□□□□□ -2.62
RAB3DO95716 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.34□□□□□ -2.62
RAB3DO95716 SNORD114-15-201ENST00000364687 72 ntBASIC-1.34□□□□□ -2.62
RAB3DO95716 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.34□□□□□ -2.62
RAB3DO95716 MIR6739-201ENST00000622461 75 ntBASIC-1.34□□□□□ -2.62
RAB3DO95716 RNU6-554P-201ENST00000410466 106 ntBASIC-1.35□□□□□ -2.63
RAB3DO95716 RNU6-794P-201ENST00000517261 64 ntBASIC-1.35□□□□□ -2.63
RAB3DO95716 SNORD115-27-201ENST00000364430 82 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 RNU6-746P-201ENST00000384112 109 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 RNU6-518P-201ENST00000516056 96 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 SNORD63.1-201ENST00000516178 80 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 MIR378F-201ENST00000578143 78 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 MIR3133-201ENST00000583157 78 ntBASIC-1.36□□□□□ -2.63
RAB3DO95716 RNU6-340P-201ENST00000364005 107 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 RNU6-106P-201ENST00000384405 107 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 RNU6-35P-201ENST00000384530 107 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 SNORA19-201ENST00000384737 128 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 snosnR66.1-201ENST00000391095 99 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 RNU7-154P-201ENST00000516194 62 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 RNY1P9-201ENST00000532431 109 ntBASIC-1.37□□□□□ -2.63
RAB3DO95716 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
RAB3DO95716 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.38□□□□□ -2.63
RAB3DO95716 SNORA26.4-201ENST00000391188 123 ntBASIC-1.38□□□□□ -2.63
RAB3DO95716 RNU6-752P-201ENST00000516376 102 ntBASIC-1.38□□□□□ -2.63
RAB3DO95716 RNU6-774P-201ENST00000363238 107 ntBASIC-1.39□□□□□ -2.63
RAB3DO95716 SNORD115-33-201ENST00000363723 82 ntBASIC-1.4□□□□□ -2.63
RAB3DO95716 RNU6-704P-201ENST00000364162 103 ntBASIC-1.4□□□□□ -2.63
RAB3DO95716 SNORD115-22-201ENST00000364456 82 ntBASIC-1.41□□□□□ -2.64
RAB3DO95716 RNU6-10P-201ENST00000384036 107 ntBASIC-1.41□□□□□ -2.64
RAB3DO95716 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.41□□□□□ -2.64
RAB3DO95716 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.41□□□□□ -2.64
RAB3DO95716 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.42□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms