Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC090617.8-201ENST00000623339 167 ntBASIC0.96□□□□□ -2.26
TRIM13O60858 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
TRIM13O60858 SNORD116-16-201ENST00000384533 92 ntBASIC0.95□□□□□ -2.26
TRIM13O60858 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.95□□□□□ -2.26
TRIM13O60858 RNU6-518P-201ENST00000516056 96 ntBASIC0.95□□□□□ -2.26
TRIM13O60858 RNU6-980P-201ENST00000516925 103 ntBASIC0.95□□□□□ -2.26
TRIM13O60858 AC243829.3-201ENST00000622177 108 ntBASIC0.95□□□□□ -2.26
TRIM13O60858 Y_RNA.74-201ENST00000362911 99 ntBASIC0.94□□□□□ -2.26
TRIM13O60858 HMGN2P22-201ENST00000427588 175 ntBASIC0.94□□□□□ -2.26
TRIM13O60858 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
TRIM13O60858 RNU1-29P-201ENST00000606574 126 ntBASIC0.94□□□□□ -2.26
TRIM13O60858 RNU6-753P-201ENST00000363926 107 ntBASIC0.93□□□□□ -2.26
TRIM13O60858 AC244090.1-201ENST00000441884 93 ntBASIC0.93□□□□□ -2.26
TRIM13O60858 AC243829.6-201ENST00000612652 106 ntBASIC0.93□□□□□ -2.26
TRIM13O60858 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.92□□□□□ -2.26
TRIM13O60858 MIR5706-201ENST00000579841 80 ntBASIC0.92□□□□□ -2.26
TRIM13O60858 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
TRIM13O60858 snoU13.31-201ENST00000607291 104 ntBASIC0.92□□□□□ -2.26
TRIM13O60858 MIR20A-201ENST00000362279 71 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 Y_RNA.282-201ENST00000364793 102 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 MIR519A2-201ENST00000384990 87 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 MIR1255B2-201ENST00000408618 67 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 AL603825.1-201ENST00000438481 80 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 SNORA40.16-201ENST00000517238 121 ntBASIC0.91□□□□□ -2.26
TRIM13O60858 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.9□□□□□ -2.27
TRIM13O60858 SNORD116.2-201ENST00000391251 93 ntBASIC0.89□□□□□ -2.27
TRIM13O60858 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.89□□□□□ -2.27
TRIM13O60858 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
TRIM13O60858 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.89□□□□□ -2.27
TRIM13O60858 MIR7110-201ENST00000612638 86 ntBASIC0.89□□□□□ -2.27
TRIM13O60858 MIR527-201ENST00000385244 85 ntBASIC0.88□□□□□ -2.27
TRIM13O60858 RNU6-337P-201ENST00000391243 106 ntBASIC0.88□□□□□ -2.27
TRIM13O60858 MIR4498-201ENST00000577599 66 ntBASIC0.88□□□□□ -2.27
TRIM13O60858 Y_RNA.327-201ENST00000365201 102 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 RNU6-35P-201ENST00000384530 107 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 SNORA49-201ENST00000386157 136 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 SNORD2-201ENST00000459163 69 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 MIR548AG1-201ENST00000579932 66 ntBASIC0.87□□□□□ -2.27
TRIM13O60858 RNU4-33P-201ENST00000364316 85 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 RNA5SP517-201ENST00000364724 117 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 RNU6-392P-201ENST00000364926 101 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
TRIM13O60858 AC069271.1-201ENST00000445577 156 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 RNU7-154P-201ENST00000516194 62 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 MIR6773-201ENST00000612812 74 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.86□□□□□ -2.27
TRIM13O60858 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRIM13O60858 SNORD114-29-201ENST00000364819 70 ntBASIC0.85□□□□□ -2.27
TRIM13O60858 Y_RNA.338-201ENST00000365320 114 ntBASIC0.85□□□□□ -2.27
TRIM13O60858 RNU6-246P-201ENST00000384702 107 ntBASIC0.85□□□□□ -2.27
TRIM13O60858 SNORA40B-201ENST00000385573 128 ntBASIC0.85□□□□□ -2.27
TRIM13O60858 SNORD115-25-201ENST00000362619 82 ntBASIC0.84□□□□□ -2.27
TRIM13O60858 SNORD1B-201ENST00000363091 84 ntBASIC0.84□□□□□ -2.27
TRIM13O60858 SNORD114-2-201ENST00000363953 78 ntBASIC0.84□□□□□ -2.27
TRIM13O60858 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
TRIM13O60858 MIR140-201ENST00000385282 100 ntBASIC0.83□□□□□ -2.28
TRIM13O60858 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
TRIM13O60858 RNU7-188P-201ENST00000517063 64 ntBASIC0.83□□□□□ -2.28
TRIM13O60858 MIR548X-201ENST00000580069 75 ntBASIC0.83□□□□□ -2.28
TRIM13O60858 SNORA25.18-201ENST00000607153 114 ntBASIC0.83□□□□□ -2.28
TRIM13O60858 RNU6-810P-201ENST00000364001 107 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 RNU6-321P-201ENST00000410912 106 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 RNU6-172P-201ENST00000411000 93 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 RNU6-1053P-201ENST00000515930 101 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 ACA64.5-201ENST00000516207 127 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 RNU6-175P-201ENST00000516896 107 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 U7.6-201ENST00000610841 64 ntBASIC0.82□□□□□ -2.28
TRIM13O60858 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRIM13O60858 Y_RNA.109-201ENST00000363215 102 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 SNORD118-201ENST00000363593 134 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 SNORA2A-201ENST00000383885 135 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 MIRLET7B-201ENST00000385140 83 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 RNU6-930P-201ENST00000390938 100 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 TRMT112P2-201ENST00000512910 132 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 RNA5SP470-201ENST00000516463 106 ntBASIC0.81□□□□□ -2.28
TRIM13O60858 MIR6857-201ENST00000613267 93 ntBASIC0.8□□□□□ -2.28
TRIM13O60858 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.8□□□□□ -2.28
TRIM13O60858 RNU6-110P-201ENST00000384508 104 ntBASIC0.79□□□□□ -2.28
TRIM13O60858 RNU6-1232P-201ENST00000516299 86 ntBASIC0.79□□□□□ -2.28
TRIM13O60858 RNU6-229P-201ENST00000516614 102 ntBASIC0.79□□□□□ -2.28
TRIM13O60858 MIR4677-201ENST00000584153 80 ntBASIC0.79□□□□□ -2.28
TRIM13O60858 MIR429-201ENST00000362106 83 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 RNU6-502P-201ENST00000362419 108 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 RNU6-458P-201ENST00000384179 107 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 MIR501-201ENST00000390204 84 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 MIR548F3-201ENST00000408509 87 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 SNORA40.8-201ENST00000411034 126 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 U6.58-201ENST00000613107 107 ntBASIC0.78□□□□□ -2.28
TRIM13O60858 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
TRIM13O60858 PSMC1P5-201ENST00000512850 177 ntBASIC0.77□□□□□ -2.29
TRIM13O60858 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
TRIM13O60858 MIR4490-201ENST00000582647 84 ntBASIC0.77□□□□□ -2.29
TRIM13O60858 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
TRIM13O60858 RNU6-1036P-201ENST00000383959 104 ntBASIC0.76□□□□□ -2.29
TRIM13O60858 Y_RNA.423-201ENST00000384057 113 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 276.2 ms