Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SNORD114-25-201ENST00000363742 72 ntBASIC-1.07□□□□□ -2.58
DDX39AO00148 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
DDX39AO00148 RNU6-907P-201ENST00000390924 102 ntBASIC-1.07□□□□□ -2.58
DDX39AO00148 RNU6-904P-201ENST00000516206 101 ntBASIC-1.07□□□□□ -2.58
DDX39AO00148 RNU6-412P-201ENST00000516434 106 ntBASIC-1.07□□□□□ -2.58
DDX39AO00148 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
DDX39AO00148 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 RNU6-10P-201ENST00000384036 107 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 RNU6-260P-201ENST00000384092 107 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 SNORA19.1-201ENST00000410656 129 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 RNU6-887P-201ENST00000410660 100 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 SNX3P1X-201ENST00000414887 175 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 snoU13.17-201ENST00000458802 104 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 SNORD18.2-201ENST00000459604 70 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 MIR4324-201ENST00000584846 72 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 MIR4773-1-201ENST00000637203 78 ntBASIC-1.08□□□□□ -2.58
DDX39AO00148 RNU6-208P-201ENST00000362431 107 ntBASIC-1.09□□□□□ -2.58
DDX39AO00148 RNU6-824P-201ENST00000363724 104 ntBASIC-1.09□□□□□ -2.58
DDX39AO00148 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.09□□□□□ -2.58
DDX39AO00148 SNORD116-21-201ENST00000384507 92 ntBASIC-1.09□□□□□ -2.58
DDX39AO00148 SCARNA17-201ENST00000516183 144 ntBASIC-1.09□□□□□ -2.58
DDX39AO00148 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.1□□□□□ -2.59
DDX39AO00148 MIR196A1-201ENST00000388006 70 ntBASIC-1.1□□□□□ -2.59
DDX39AO00148 AC026421.1-201ENST00000519101 163 ntBASIC-1.1□□□□□ -2.59
DDX39AO00148 SNORD116-14-201ENST00000383894 92 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 SNORD116-17-201ENST00000383929 92 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 SNORD116-15-201ENST00000384445 92 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 SNORD116-19-201ENST00000384729 92 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 MIR124-2-201ENST00000385081 109 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 snosnR66.1-201ENST00000391095 99 ntBASIC-1.11□□□□□ -2.59
DDX39AO00148 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 MIR203A-201ENST00000384836 110 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 RNA5SP147-201ENST00000516493 109 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 RNU6-794P-201ENST00000517261 64 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 AL353803.5-201ENST00000599815 141 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 MIR6509-201ENST00000614603 85 ntBASIC-1.12□□□□□ -2.59
DDX39AO00148 SNORD116-10-201ENST00000363791 102 ntBASIC-1.13□□□□□ -2.59
DDX39AO00148 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.13□□□□□ -2.59
DDX39AO00148 MIR3657-201ENST00000584818 117 ntBASIC-1.13□□□□□ -2.59
DDX39AO00148 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.13□□□□□ -2.59
DDX39AO00148 SNORA2.1-201ENST00000363089 137 ntBASIC-1.14□□□□□ -2.59
DDX39AO00148 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.14□□□□□ -2.59
DDX39AO00148 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
DDX39AO00148 MIR4464-201ENST00000580818 92 ntBASIC-1.14□□□□□ -2.59
DDX39AO00148 MIR4320-201ENST00000636981 65 ntBASIC-1.14□□□□□ -2.59
DDX39AO00148 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 SNORA33.1-201ENST00000364957 130 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 AL691482.2-201ENST00000457453 84 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 RNU6-274P-201ENST00000459566 107 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 MIR4796-201ENST00000580742 81 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 U6.81-201ENST00000612550 106 ntBASIC-1.15□□□□□ -2.59
DDX39AO00148 MIR147A-201ENST00000385079 72 ntBASIC-1.16□□□□□ -2.6
DDX39AO00148 SNORD83B-201ENST00000386745 93 ntBASIC-1.16□□□□□ -2.6
DDX39AO00148 RNA5SP470-201ENST00000516463 106 ntBASIC-1.16□□□□□ -2.6
DDX39AO00148 SNORD114-17-201ENST00000364699 75 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 RNU6-431P-201ENST00000383874 107 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 SNORD64-201ENST00000386683 67 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 MIR1302-5-201ENST00000408164 150 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 MIR1255B2-201ENST00000408618 67 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 AL500527.2-201ENST00000454105 95 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.17□□□□□ -2.6
DDX39AO00148 RNU6-537P-201ENST00000517277 103 ntBASIC-1.17□□□□□ -2.6
DDX39AO00148 MIR590-201ENST00000385008 97 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 MIR1468-201ENST00000410600 86 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 RNU7-61P-201ENST00000515897 61 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 AL445584.3-201ENST00000617173 78 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 MIR6888-201ENST00000621977 67 ntBASIC-1.18□□□□□ -2.6
DDX39AO00148 MIR1236-201ENST00000408340 102 ntBASIC-1.19□□□□□ -2.6
DDX39AO00148 CYP3A54P-201ENST00000566950 75 ntBASIC-1.19□□□□□ -2.6
DDX39AO00148 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.2□□□□□ -2.6
DDX39AO00148 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.21□□□□□ -2.6
DDX39AO00148 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 MIR521-2-201ENST00000384818 87 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 MIR3133-201ENST00000583157 78 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 MIR382-201ENST00000637119 76 ntBASIC-1.22□□□□□ -2.6
DDX39AO00148 RNU6-704P-201ENST00000364162 103 ntBASIC-1.23□□□□□ -2.61
DDX39AO00148 RNU6-162P-201ENST00000516228 103 ntBASIC-1.23□□□□□ -2.61
DDX39AO00148 AC140658.3-201ENST00000567603 271 ntBASIC-1.23□□□□□ -2.61
DDX39AO00148 U7.3-201ENST00000616123 62 ntBASIC-1.23□□□□□ -2.61
DDX39AO00148 uc_338.19-201ENST00000616808 99 ntBASIC-1.23□□□□□ -2.61
DDX39AO00148 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.24□□□□□ -2.61
DDX39AO00148 AL450471.1-201ENST00000447509 127 ntBASIC-1.24□□□□□ -2.61
DDX39AO00148 RNU7-153P-201ENST00000516455 62 ntBASIC-1.24□□□□□ -2.61
DDX39AO00148 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.24□□□□□ -2.61
DDX39AO00148 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 MIR601-201ENST00000385256 79 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 RNU6-554P-201ENST00000410466 106 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 RNU6-109P-201ENST00000516364 107 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 RNU6-752P-201ENST00000516376 102 ntBASIC-1.25□□□□□ -2.61
DDX39AO00148 RNU6-184P-201ENST00000516514 107 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms