Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.59□□□□□ -2.66
SMKR1H3BMG3 U6.95-201ENST00000636931 70 ntBASIC-1.59□□□□□ -2.66
SMKR1H3BMG3 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 MIR521-2-201ENST00000384818 87 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 RNU6-887P-201ENST00000410660 100 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 SNORD33.1-201ENST00000516213 88 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 U6.81-201ENST00000612550 106 ntBASIC-1.6□□□□□ -2.67
SMKR1H3BMG3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 SNORA26.4-201ENST00000391188 123 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 SCARNA23-201ENST00000516060 130 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 RNU7-200P-201ENST00000516105 62 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.61□□□□□ -2.67
SMKR1H3BMG3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.62□□□□□ -2.67
SMKR1H3BMG3 AC026421.1-201ENST00000519101 163 ntBASIC-1.62□□□□□ -2.67
SMKR1H3BMG3 MIR4796-201ENST00000580742 81 ntBASIC-1.62□□□□□ -2.67
SMKR1H3BMG3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.62□□□□□ -2.67
SMKR1H3BMG3 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.63□□□□□ -2.67
SMKR1H3BMG3 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.63□□□□□ -2.67
SMKR1H3BMG3 RNU6-971P-201ENST00000516920 106 ntBASIC-1.63□□□□□ -2.67
SMKR1H3BMG3 MIR378F-201ENST00000578143 78 ntBASIC-1.63□□□□□ -2.67
SMKR1H3BMG3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.64□□□□□ -2.67
SMKR1H3BMG3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.64□□□□□ -2.67
SMKR1H3BMG3 SNORD116-10-201ENST00000363791 102 ntBASIC-1.65□□□□□ -2.67
SMKR1H3BMG3 SNORD114-15-201ENST00000364687 72 ntBASIC-1.65□□□□□ -2.67
SMKR1H3BMG3 SNORD63.1-201ENST00000516178 80 ntBASIC-1.65□□□□□ -2.67
SMKR1H3BMG3 RNU6-904P-201ENST00000516206 101 ntBASIC-1.65□□□□□ -2.67
SMKR1H3BMG3 RNU6-412P-201ENST00000516434 106 ntBASIC-1.65□□□□□ -2.67
SMKR1H3BMG3 RNU6-746P-201ENST00000384112 109 ntBASIC-1.66□□□□□ -2.68
SMKR1H3BMG3 MIR29B1-201ENST00000385015 81 ntBASIC-1.66□□□□□ -2.68
SMKR1H3BMG3 MIR1236-201ENST00000408340 102 ntBASIC-1.66□□□□□ -2.68
SMKR1H3BMG3 MIR6739-201ENST00000622461 75 ntBASIC-1.66□□□□□ -2.68
SMKR1H3BMG3 MIR519A2-201ENST00000384990 87 ntBASIC-1.67□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.67□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.67□□□□□ -2.68
SMKR1H3BMG3 AC132825.6-201ENST00000638861 357 ntBASIC-1.67□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 RNU6-752P-201ENST00000516376 102 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 RNU6-659P-201ENST00000516454 104 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 MIR4306-201ENST00000583390 91 ntBASIC-1.68□□□□□ -2.68
SMKR1H3BMG3 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.69□□□□□ -2.68
SMKR1H3BMG3 RNU6-880P-201ENST00000384526 107 ntBASIC-1.69□□□□□ -2.68
SMKR1H3BMG3 SNORA19.1-201ENST00000410656 129 ntBASIC-1.69□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 RNU6-537P-201ENST00000517277 103 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 MIR6738-201ENST00000619620 64 ntBASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.7□□□□□ -2.68
SMKR1H3BMG3 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.71□□□□□ -2.68
SMKR1H3BMG3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.71□□□□□ -2.68
SMKR1H3BMG3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.71□□□□□ -2.68
SMKR1H3BMG3 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.71□□□□□ -2.68
SMKR1H3BMG3 MIR6818-201ENST00000621576 65 ntBASIC-1.71□□□□□ -2.68
SMKR1H3BMG3 RNY1P5-201ENST00000383890 115 ntBASIC-1.72□□□□□ -2.68
SMKR1H3BMG3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.72□□□□□ -2.68
SMKR1H3BMG3 AL021921.1-201ENST00000442774 93 ntBASIC-1.72□□□□□ -2.68
SMKR1H3BMG3 AL450471.1-201ENST00000447509 127 ntBASIC-1.72□□□□□ -2.68
SMKR1H3BMG3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.72□□□□□ -2.68
SMKR1H3BMG3 MIR587-201ENST00000384845 96 ntBASIC-1.73□□□□□ -2.69
SMKR1H3BMG3 AL353691.2-201ENST00000443795 59 ntBASIC-1.73□□□□□ -2.69
SMKR1H3BMG3 RNU6-346P-201ENST00000516288 111 ntBASIC-1.73□□□□□ -2.69
SMKR1H3BMG3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.73□□□□□ -2.69
SMKR1H3BMG3 SNORD116-21-201ENST00000384507 92 ntBASIC-1.74□□□□□ -2.69
SMKR1H3BMG3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.74□□□□□ -2.69
SMKR1H3BMG3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.75□□□□□ -2.69
SMKR1H3BMG3 SNORD115-22-201ENST00000364456 82 ntBASIC-1.75□□□□□ -2.69
SMKR1H3BMG3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.75□□□□□ -2.69
SMKR1H3BMG3 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.75□□□□□ -2.69
SMKR1H3BMG3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.75□□□□□ -2.69
SMKR1H3BMG3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 RNU6-340P-201ENST00000364005 107 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 RNU7-61P-201ENST00000515897 61 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 MIR4324-201ENST00000584846 72 ntBASIC-1.76□□□□□ -2.69
SMKR1H3BMG3 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.77□□□□□ -2.69
SMKR1H3BMG3 RNU7-153P-201ENST00000516455 62 ntBASIC-1.77□□□□□ -2.69
SMKR1H3BMG3 MIR4719-201ENST00000585233 84 ntBASIC-1.77□□□□□ -2.69
SMKR1H3BMG3 MIR1302-5-201ENST00000408164 150 ntBASIC-1.78□□□□□ -2.69
SMKR1H3BMG3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.78□□□□□ -2.69
SMKR1H3BMG3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.79□□□□□ -2.7
SMKR1H3BMG3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 MIR590-201ENST00000385008 97 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 RNU6-255P-201ENST00000516957 105 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 MIR3165-201ENST00000579874 75 ntBASIC-1.8□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.81□□□□□ -2.7
SMKR1H3BMG3 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.81□□□□□ -2.7
SMKR1H3BMG3 MIR527-201ENST00000385244 85 ntBASIC-1.81□□□□□ -2.7
SMKR1H3BMG3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.81□□□□□ -2.7
SMKR1H3BMG3 MIR507-201ENST00000385234 94 ntBASIC-1.82□□□□□ -2.7
SMKR1H3BMG3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.82□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms