Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MIR548E-201ENST00000408287 88 ntBASIC1.98□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR548F3-201ENST00000408509 87 ntBASIC1.97□□□□□ -2.09
PCDHGA4Q9Y5G9 U7.7-201ENST00000459276 60 ntBASIC1.97□□□□□ -2.09
PCDHGA4Q9Y5G9 MIR4498-201ENST00000577599 66 ntBASIC1.97□□□□□ -2.09
PCDHGA4Q9Y5G9 U6.96-201ENST00000636425 70 ntBASIC1.97□□□□□ -2.09
PCDHGA4Q9Y5G9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.96□□□□□ -2.1
PCDHGA4Q9Y5G9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.95□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR548AE1-201ENST00000583292 70 ntBASIC1.95□□□□□ -2.1
PCDHGA4Q9Y5G9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
PCDHGA4Q9Y5G9 FABP5P4-201ENST00000437203 171 ntBASIC1.94□□□□□ -2.1
PCDHGA4Q9Y5G9 RNU6-518P-201ENST00000516056 96 ntBASIC1.94□□□□□ -2.1
PCDHGA4Q9Y5G9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 RNA5SP160-201ENST00000364866 120 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR527-201ENST00000385244 85 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 SNORA40B-201ENST00000385573 128 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR3612-201ENST00000579753 87 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR4473-201ENST00000583731 91 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR6828-201ENST00000636181 60 ntBASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
PCDHGA4Q9Y5G9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR573-201ENST00000384964 99 ntBASIC1.92□□□□□ -2.1
PCDHGA4Q9Y5G9 AC006210.1-201ENST00000424882 111 ntBASIC1.92□□□□□ -2.1
PCDHGA4Q9Y5G9 AC108667.1-201ENST00000428618 249 ntBASIC1.92□□□□□ -2.1
PCDHGA4Q9Y5G9 Y_RNA.282-201ENST00000364793 102 ntBASIC1.91□□□□□ -2.1
PCDHGA4Q9Y5G9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.91□□□□□ -2.1
PCDHGA4Q9Y5G9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
PCDHGA4Q9Y5G9 MIR516B1-201ENST00000385211 90 ntBASIC1.9□□□□□ -2.11
PCDHGA4Q9Y5G9 RNA5SP182-201ENST00000516064 82 ntBASIC1.9□□□□□ -2.11
PCDHGA4Q9Y5G9 RNA5SP227-201ENST00000516184 113 ntBASIC1.9□□□□□ -2.11
PCDHGA4Q9Y5G9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.11
PCDHGA4Q9Y5G9 SNORD110-201ENST00000408189 75 ntBASIC1.89□□□□□ -2.11
PCDHGA4Q9Y5G9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
PCDHGA4Q9Y5G9 snoU13.31-201ENST00000607291 104 ntBASIC1.88□□□□□ -2.11
PCDHGA4Q9Y5G9 AC243829.6-201ENST00000612652 106 ntBASIC1.88□□□□□ -2.11
PCDHGA4Q9Y5G9 RNU6-838P-201ENST00000363399 108 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 RNU6-810P-201ENST00000364001 107 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 SNORA25-201ENST00000384384 134 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 SNORA17.3-201ENST00000391159 129 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 MIR1287-201ENST00000408492 90 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 MIR7111-201ENST00000619751 72 ntBASIC1.87□□□□□ -2.11
PCDHGA4Q9Y5G9 RNU6-246P-201ENST00000384702 107 ntBASIC1.86□□□□□ -2.11
PCDHGA4Q9Y5G9 AC090617.8-201ENST00000623339 167 ntBASIC1.86□□□□□ -2.11
PCDHGA4Q9Y5G9 MIR378A-201ENST00000362177 66 ntBASIC1.85□□□□□ -2.11
PCDHGA4Q9Y5G9 MIR519A2-201ENST00000384990 87 ntBASIC1.85□□□□□ -2.11
PCDHGA4Q9Y5G9 MIR1255B2-201ENST00000408618 67 ntBASIC1.85□□□□□ -2.11
PCDHGA4Q9Y5G9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
PCDHGA4Q9Y5G9 AC243829.3-201ENST00000622177 108 ntBASIC1.84□□□□□ -2.11
PCDHGA4Q9Y5G9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDHGA4Q9Y5G9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
PCDHGA4Q9Y5G9 RNU6-997P-201ENST00000384725 107 ntBASIC1.83□□□□□ -2.12
PCDHGA4Q9Y5G9 MIR545-201ENST00000385085 106 ntBASIC1.83□□□□□ -2.12
PCDHGA4Q9Y5G9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
PCDHGA4Q9Y5G9 RNU6-172P-201ENST00000411000 93 ntBASIC1.83□□□□□ -2.12
PCDHGA4Q9Y5G9 MIR4285-201ENST00000581001 85 ntBASIC1.83□□□□□ -2.12
PCDHGA4Q9Y5G9 RNA5SP190-201ENST00000365222 118 ntBASIC1.82□□□□□ -2.12
PCDHGA4Q9Y5G9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
PCDHGA4Q9Y5G9 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
PCDHGA4Q9Y5G9 SNORD13-201ENST00000459299 104 ntBASIC1.81□□□□□ -2.12
PCDHGA4Q9Y5G9 RNA5SP268-201ENST00000516828 124 ntBASIC1.81□□□□□ -2.12
PCDHGA4Q9Y5G9 AC025627.3-201ENST00000582078 182 ntBASIC1.81□□□□□ -2.12
PCDHGA4Q9Y5G9 SNORD1B-201ENST00000363091 84 ntBASIC1.8□□□□□ -2.12
PCDHGA4Q9Y5G9 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
PCDHGA4Q9Y5G9 SNORA25.15-201ENST00000516487 89 ntBASIC1.8□□□□□ -2.12
PCDHGA4Q9Y5G9 RNA5SP327-201ENST00000362494 101 ntBASIC1.79□□□□□ -2.12
PCDHGA4Q9Y5G9 AC244090.1-201ENST00000441884 93 ntBASIC1.79□□□□□ -2.12
PCDHGA4Q9Y5G9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHGA4Q9Y5G9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
PCDHGA4Q9Y5G9 MIR429-201ENST00000362106 83 ntBASIC1.78□□□□□ -2.12
PCDHGA4Q9Y5G9 SNORA36.1-201ENST00000363424 132 ntBASIC1.78□□□□□ -2.12
PCDHGA4Q9Y5G9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.78□□□□□ -2.12
PCDHGA4Q9Y5G9 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
PCDHGA4Q9Y5G9 MIR20A-201ENST00000362279 71 ntBASIC1.77□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR19B1-201ENST00000384829 87 ntBASIC1.77□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR200A-201ENST00000384875 90 ntBASIC1.77□□□□□ -2.13
PCDHGA4Q9Y5G9 RNU6-419P-201ENST00000517030 63 ntBASIC1.77□□□□□ -2.13
PCDHGA4Q9Y5G9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
PCDHGA4Q9Y5G9 RNU6-247P-201ENST00000362636 107 ntBASIC1.76□□□□□ -2.13
PCDHGA4Q9Y5G9 SNORD2-201ENST00000459163 69 ntBASIC1.76□□□□□ -2.13
PCDHGA4Q9Y5G9 RNU7-154P-201ENST00000516194 62 ntBASIC1.76□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR4490-201ENST00000582647 84 ntBASIC1.76□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR18A-201ENST00000362310 71 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 Y_RNA.109-201ENST00000363215 102 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 Y_RNA.118-201ENST00000363300 101 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 RNA5SP363-201ENST00000365072 115 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 SNORA70.25-201ENST00000612741 95 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR8070-201ENST00000616510 88 ntBASIC1.75□□□□□ -2.13
PCDHGA4Q9Y5G9 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
PCDHGA4Q9Y5G9 RNU4-62P-201ENST00000410125 130 ntBASIC1.74□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR7107-201ENST00000611489 80 ntBASIC1.74□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR8081-201ENST00000611533 95 ntBASIC1.74□□□□□ -2.13
PCDHGA4Q9Y5G9 RNU4-45P-201ENST00000365469 141 ntBASIC1.73□□□□□ -2.13
PCDHGA4Q9Y5G9 MIR499A-201ENST00000384903 122 ntBASIC1.73□□□□□ -2.13
PCDHGA4Q9Y5G9 AP1B1P2-201ENST00000416196 106 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms