Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-62P-201ENST00000516526 102 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 AC068339.1-201ENST00000526965 141 ntBASIC-0.53□□□□□ -2.49
CCDC88CQ9P219 SNORD115-23-201ENST00000364461 82 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 SNORD74.6-201ENST00000364796 70 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-431P-201ENST00000383874 107 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 SNORD116-18-201ENST00000383961 92 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 MIR124-2-201ENST00000385081 109 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-816P-201ENST00000390914 107 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 AC021146.6-201ENST00000514659 117 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU7-61P-201ENST00000515897 61 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-772P-201ENST00000516042 105 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 MIR3657-201ENST00000584818 117 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 SNORD45B-201ENST00000364617 72 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 MIR519A2-201ENST00000384990 87 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 MIR5009-201ENST00000578736 100 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.54□□□□□ -2.5
CCDC88CQ9P219 RNU6-208P-201ENST00000362431 107 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 SNORD115-25-201ENST00000362619 82 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 SNORD58C-201ENST00000365223 64 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 SNORD83B-201ENST00000386745 93 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR548U-201ENST00000390728 81 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR1255B2-201ENST00000408618 67 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 RNA5SP147-201ENST00000516493 109 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 SNORA40.17-201ENST00000517256 115 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR548X2-201ENST00000579776 100 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR4777-201ENST00000583710 86 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 RNU6-200P-201ENST00000364743 107 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 SNORD75.2-201ENST00000408784 58 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 AL691482.2-201ENST00000457453 84 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 AP001328.1-201ENST00000528550 176 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR4306-201ENST00000583390 91 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 AL445584.3-201ENST00000617173 78 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 MIR198-201ENST00000637333 62 ntBASIC-0.55□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.56□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.56□□□□□ -2.5
CCDC88CQ9P219 AL353813.1-201ENST00000440700 253 ntBASIC-0.56□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.56□□□□□ -2.5
CCDC88CQ9P219 RNU6-973P-201ENST00000364690 107 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 SCARNA17-201ENST00000516183 144 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 SNORA18.5-201ENST00000516616 101 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.57□□□□□ -2.5
CCDC88CQ9P219 RNY3P2-201ENST00000362918 102 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 RNU6-990P-201ENST00000364385 104 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.58□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 SNORA24B-201ENST00000384176 131 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 MIR382-201ENST00000637119 76 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 RNU4-32P-201ENST00000363404 141 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 SNORA33.1-201ENST00000364957 130 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 RNU6-804P-201ENST00000384286 107 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 MIR548A1-201ENST00000385041 97 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 RNU7-107P-201ENST00000459121 61 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 U7.5-201ENST00000517224 61 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 MIR6888-201ENST00000621977 67 ntBASIC-0.59□□□□□ -2.5
CCDC88CQ9P219 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-257P-201ENST00000410238 98 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 MIR3064-201ENST00000581130 66 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 MIR4439-201ENST00000583746 80 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 MIR548Z-201ENST00000584743 97 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-624P-201ENST00000363411 107 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 SNORD114-17-201ENST00000364699 75 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-10P-201ENST00000384036 107 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNY1P7-201ENST00000384743 110 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 RNU6-592P-201ENST00000411333 103 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 MIR378F-201ENST00000578143 78 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 MIR4694-201ENST00000578534 80 ntBASIC-0.6□□□□□ -2.51
CCDC88CQ9P219 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 RNU6-382P-201ENST00000365181 106 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 MIR521-2-201ENST00000384818 87 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 SNORA40-201ENST00000388090 126 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 RNU6-972P-201ENST00000391208 107 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 RNU6-519P-201ENST00000410590 108 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 SNX3P1X-201ENST00000414887 175 ntBASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.61□□□□□ -2.51
CCDC88CQ9P219 RNU6-795P-201ENST00000516323 103 ntBASIC-0.61□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms