Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNA5SP327-201ENST00000362494 101 ntBASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 RNA5SP227-201ENST00000516184 113 ntBASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.6□□□□□ -2.15
PRDM9Q9NQV7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 Y_RNA.379-201ENST00000365653 102 ntBASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.59□□□□□ -2.15
PRDM9Q9NQV7 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 MIR652-201ENST00000385278 98 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 MIR548E-201ENST00000408287 88 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 AC006210.1-201ENST00000424882 111 ntBASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.58□□□□□ -2.16
PRDM9Q9NQV7 RNU6-1312P-201ENST00000362425 108 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNA5SP190-201ENST00000365222 118 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
PRDM9Q9NQV7 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 Y_RNA.246-201ENST00000364495 108 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
PRDM9Q9NQV7 SNORD110-201ENST00000408189 75 ntBASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRDM9Q9NQV7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR582-201ENST00000365731 98 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR4498-201ENST00000577599 66 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 MIR548AE1-201ENST00000583292 70 ntBASIC1.54□□□□□ -2.16
PRDM9Q9NQV7 AL021921.1-201ENST00000442774 93 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 SNORD124-201ENST00000459577 104 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 RNA5SP268-201ENST00000516828 124 ntBASIC1.53□□□□□ -2.16
PRDM9Q9NQV7 MIR18A-201ENST00000362310 71 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORD114-24-201ENST00000365029 72 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP247-201ENST00000411181 105 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP255-201ENST00000516370 107 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 MIR4473-201ENST00000583731 91 ntBASIC1.52□□□□□ -2.17
PRDM9Q9NQV7 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
PRDM9Q9NQV7 SNORA25.8-201ENST00000364831 128 ntBASIC1.51□□□□□ -2.17
PRDM9Q9NQV7 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 SNORA41B-201ENST00000384785 128 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 RNU4-88P-201ENST00000411220 86 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 RNU6-231P-201ENST00000517122 103 ntBASIC1.5□□□□□ -2.17
PRDM9Q9NQV7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 RNU1-124P-201ENST00000363861 145 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 Y_RNA.325-201ENST00000365171 122 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 snoU13.31-201ENST00000607291 104 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
PRDM9Q9NQV7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORD116-16-201ENST00000384533 92 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 RNA5SP94-201ENST00000516917 108 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 U6.96-201ENST00000636425 70 ntBASIC1.48□□□□□ -2.17
PRDM9Q9NQV7 SNORA17.3-201ENST00000391159 129 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 CYP3A54P-201ENST00000566950 75 ntBASIC1.47□□□□□ -2.17
PRDM9Q9NQV7 MIR378A-201ENST00000362177 66 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 AC244090.1-201ENST00000441884 93 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 SNORD2-201ENST00000459163 69 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 MIR5706-201ENST00000579841 80 ntBASIC1.46□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.74-201ENST00000362911 99 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 MIR516B1-201ENST00000385211 90 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 AC011195.1-201ENST00000578177 177 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 MIR548AD-201ENST00000584780 82 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 AC243829.3-201ENST00000622177 108 ntBASIC1.45□□□□□ -2.18
PRDM9Q9NQV7 SNORD99-201ENST00000408612 74 ntBASIC1.44□□□□□ -2.18
PRDM9Q9NQV7 RNU6-518P-201ENST00000516056 96 ntBASIC1.44□□□□□ -2.18
PRDM9Q9NQV7 MIR20A-201ENST00000362279 71 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 SNORA9.1-201ENST00000362412 131 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-753P-201ENST00000363926 107 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-1246P-201ENST00000391064 107 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU6-980P-201ENST00000516925 103 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 SNORA31.24-201ENST00000517232 57 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 MIR4303-201ENST00000581299 66 ntBASIC1.43□□□□□ -2.18
PRDM9Q9NQV7 RNU1-42P-201ENST00000364033 160 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 RNA5SP404-201ENST00000517118 132 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 AC243829.6-201ENST00000612652 106 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 SNORA70.25-201ENST00000612741 95 ntBASIC1.42□□□□□ -2.18
PRDM9Q9NQV7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR1323-201ENST00000408090 73 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 MIR1304-201ENST00000408243 91 ntBASIC1.41□□□□□ -2.18
PRDM9Q9NQV7 RNU4-62P-201ENST00000410125 130 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 RNU6-321P-201ENST00000410912 106 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 HMGN2P22-201ENST00000427588 175 ntBASIC1.4□□□□□ -2.19
PRDM9Q9NQV7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AL354695.1-201ENST00000427935 228 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 RNU7-154P-201ENST00000516194 62 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms