Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 SNORD116.2-201ENST00000391251 93 ntBASIC2.06□□□□□ -2.08
NBPF3Q9H094 SNORA15B-2-201ENST00000384058 135 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 SNORA15B-1-201ENST00000384334 135 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 RNU6-269P-201ENST00000391077 97 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 RNA5SP484-201ENST00000458857 111 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 RNU7-95P-201ENST00000459222 64 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 RNU6-469P-201ENST00000516253 101 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 RNU6-135P-201ENST00000516769 101 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 MIR4255-201ENST00000579351 72 ntBASIC2.05□□□□□ -2.08
NBPF3Q9H094 MIR758-201ENST00000390227 88 ntBASIC2.04□□□□□ -2.08
NBPF3Q9H094 MIR1276-201ENST00000408707 83 ntBASIC2.04□□□□□ -2.08
NBPF3Q9H094 MIR502-201ENST00000606349 86 ntBASIC2.04□□□□□ -2.08
NBPF3Q9H094 MIR6504-201ENST00000613520 61 ntBASIC2.04□□□□□ -2.08
NBPF3Q9H094 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NBPF3Q9H094 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
NBPF3Q9H094 Y_RNA.327-201ENST00000365201 102 ntBASIC2.03□□□□□ -2.08
NBPF3Q9H094 SNORA40.16-201ENST00000517238 121 ntBASIC2.03□□□□□ -2.08
NBPF3Q9H094 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NBPF3Q9H094 SNORA63.6-201ENST00000364921 119 ntBASIC2.02□□□□□ -2.09
NBPF3Q9H094 SNORD18A-201ENST00000363753 72 ntBASIC2.01□□□□□ -2.09
NBPF3Q9H094 MIR582-201ENST00000365731 98 ntBASIC2.01□□□□□ -2.09
NBPF3Q9H094 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.01□□□□□ -2.09
NBPF3Q9H094 RNU6-392P-201ENST00000364926 101 ntBASIC2□□□□□ -2.09
NBPF3Q9H094 RNA5SP47-201ENST00000517230 109 ntBASIC2□□□□□ -2.09
NBPF3Q9H094 SNORA8.2-201ENST00000384372 139 ntBASIC1.99□□□□□ -2.09
NBPF3Q9H094 MIR548F3-201ENST00000408509 87 ntBASIC1.99□□□□□ -2.09
NBPF3Q9H094 MIR652-201ENST00000385278 98 ntBASIC1.98□□□□□ -2.09
NBPF3Q9H094 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.98□□□□□ -2.09
NBPF3Q9H094 SCARNA17.3-201ENST00000516381 125 ntBASIC1.98□□□□□ -2.09
NBPF3Q9H094 SNORA25.8-201ENST00000364831 128 ntBASIC1.97□□□□□ -2.09
NBPF3Q9H094 RNU6-997P-201ENST00000384725 107 ntBASIC1.97□□□□□ -2.09
NBPF3Q9H094 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
NBPF3Q9H094 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.97□□□□□ -2.09
NBPF3Q9H094 MIR548E-201ENST00000408287 88 ntBASIC1.96□□□□□ -2.1
NBPF3Q9H094 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
NBPF3Q9H094 MIR548AE1-201ENST00000583292 70 ntBASIC1.96□□□□□ -2.1
NBPF3Q9H094 RNU6-42P-201ENST00000384165 107 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 SNORD116-16-201ENST00000384533 92 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 MIR517C-201ENST00000385103 95 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 RNU1-78P-201ENST00000391248 165 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 MIR4422-201ENST00000581938 83 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 MIR7110-201ENST00000612638 86 ntBASIC1.95□□□□□ -2.1
NBPF3Q9H094 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
NBPF3Q9H094 MIR4473-201ENST00000583731 91 ntBASIC1.94□□□□□ -2.1
NBPF3Q9H094 Y_RNA.407-201ENST00000383986 113 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 Y_RNA.540-201ENST00000384638 111 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 SNORD89-201ENST00000390981 114 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 SNORA70.22-201ENST00000517160 124 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 CYP3A54P-201ENST00000566950 75 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 MIR548X-201ENST00000580069 75 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 MIR4452-201ENST00000583004 71 ntBASIC1.93□□□□□ -2.1
NBPF3Q9H094 MIR545-201ENST00000385085 106 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 U7.7-201ENST00000459276 60 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 RNU6-518P-201ENST00000516056 96 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 RNU1-92P-201ENST00000517017 135 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 SNORD53B-201ENST00000577887 78 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 MIR3678-201ENST00000578455 94 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 AC090617.8-201ENST00000623339 167 ntBASIC1.92□□□□□ -2.1
NBPF3Q9H094 MIR1323-201ENST00000408090 73 ntBASIC1.91□□□□□ -2.1
NBPF3Q9H094 SCARNA16.5-201ENST00000517114 183 ntBASIC1.91□□□□□ -2.1
NBPF3Q9H094 AL162376.1-201ENST00000624117 175 ntBASIC1.91□□□□□ -2.1
NBPF3Q9H094 U6.96-201ENST00000636425 70 ntBASIC1.91□□□□□ -2.1
NBPF3Q9H094 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
NBPF3Q9H094 RNU6-810P-201ENST00000364001 107 ntBASIC1.9□□□□□ -2.11
NBPF3Q9H094 SNORA40B-201ENST00000385573 128 ntBASIC1.9□□□□□ -2.11
NBPF3Q9H094 RNA5SP220-201ENST00000516298 104 ntBASIC1.9□□□□□ -2.11
NBPF3Q9H094 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.9□□□□□ -2.11
NBPF3Q9H094 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.89□□□□□ -2.11
NBPF3Q9H094 MIR222-201ENST00000384992 110 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 MIR527-201ENST00000385244 85 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 SNORD105-201ENST00000386910 85 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 AC002429.1-201ENST00000437672 148 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 AL021921.1-201ENST00000442774 93 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.89□□□□□ -2.11
NBPF3Q9H094 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.89□□□□□ -2.11
NBPF3Q9H094 Y_RNA.74-201ENST00000362911 99 ntBASIC1.88□□□□□ -2.11
NBPF3Q9H094 RNU1-42P-201ENST00000364033 160 ntBASIC1.88□□□□□ -2.11
NBPF3Q9H094 Y_RNA.282-201ENST00000364793 102 ntBASIC1.88□□□□□ -2.11
NBPF3Q9H094 RNA5SP363-201ENST00000365072 115 ntBASIC1.88□□□□□ -2.11
NBPF3Q9H094 RNA5SP480-201ENST00000516840 109 ntBASIC1.88□□□□□ -2.11
NBPF3Q9H094 SNORD12-201ENST00000391002 90 ntBASIC1.87□□□□□ -2.11
NBPF3Q9H094 MIR6734-201ENST00000621166 68 ntBASIC1.87□□□□□ -2.11
NBPF3Q9H094 MIR516B1-201ENST00000385211 90 ntBASIC1.86□□□□□ -2.11
NBPF3Q9H094 RNA5SP102-201ENST00000516865 106 ntBASIC1.86□□□□□ -2.11
NBPF3Q9H094 AC006210.1-201ENST00000424882 111 ntBASIC1.85□□□□□ -2.11
NBPF3Q9H094 RNU6-1110P-201ENST00000516462 101 ntBASIC1.85□□□□□ -2.11
NBPF3Q9H094 MIR3612-201ENST00000579753 87 ntBASIC1.85□□□□□ -2.11
NBPF3Q9H094 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NBPF3Q9H094 SNORD1B-201ENST00000363091 84 ntBASIC1.84□□□□□ -2.11
NBPF3Q9H094 MIR519A2-201ENST00000384990 87 ntBASIC1.84□□□□□ -2.11
NBPF3Q9H094 RNU6-172P-201ENST00000411000 93 ntBASIC1.84□□□□□ -2.11
NBPF3Q9H094 MIR548AG1-201ENST00000579932 66 ntBASIC1.84□□□□□ -2.11
NBPF3Q9H094 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.83□□□□□ -2.12
NBPF3Q9H094 SNORA67.6-201ENST00000391093 99 ntBASIC1.83□□□□□ -2.12
NBPF3Q9H094 MIR1255B2-201ENST00000408618 67 ntBASIC1.83□□□□□ -2.12
NBPF3Q9H094 RNU6-838P-201ENST00000363399 108 ntBASIC1.82□□□□□ -2.12
NBPF3Q9H094 MIR573-201ENST00000384964 99 ntBASIC1.82□□□□□ -2.12
NBPF3Q9H094 SNORD110-201ENST00000408189 75 ntBASIC1.82□□□□□ -2.12
NBPF3Q9H094 RNA5SP227-201ENST00000516184 113 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms