Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 RNU6-907P-201ENST00000390924 102 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 MIR3064-201ENST00000581130 66 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 MIR3140-201ENST00000583685 90 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 U6.95-201ENST00000636931 70 ntBASIC-1.11□□□□□ -2.59
CHMP4AQ9BY43 SNORA63.2-201ENST00000362603 126 ntBASIC-1.12□□□□□ -2.59
CHMP4AQ9BY43 RNU4-36P-201ENST00000364294 144 ntBASIC-1.12□□□□□ -2.59
CHMP4AQ9BY43 RNY1P5-201ENST00000383890 115 ntBASIC-1.12□□□□□ -2.59
CHMP4AQ9BY43 SNORD57-201ENST00000448188 72 ntBASIC-1.12□□□□□ -2.59
CHMP4AQ9BY43 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.12□□□□□ -2.59
CHMP4AQ9BY43 RNU6-519P-201ENST00000410590 108 ntBASIC-1.13□□□□□ -2.59
CHMP4AQ9BY43 AC104996.3-201ENST00000590718 94 ntBASIC-1.13□□□□□ -2.59
CHMP4AQ9BY43 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 AC021146.6-201ENST00000514659 117 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 RNU6-795P-201ENST00000516323 103 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 MIR548Z-201ENST00000584743 97 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 MIR6851-201ENST00000617060 67 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 AL627230.5-201ENST00000619807 58 ntBASIC-1.14□□□□□ -2.59
CHMP4AQ9BY43 RNU6-973P-201ENST00000364690 107 ntBASIC-1.15□□□□□ -2.59
CHMP4AQ9BY43 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.15□□□□□ -2.59
CHMP4AQ9BY43 SNORD4B-201ENST00000459083 72 ntBASIC-1.15□□□□□ -2.59
CHMP4AQ9BY43 MIR409-201ENST00000362237 79 ntBASIC-1.16□□□□□ -2.6
CHMP4AQ9BY43 RNU6-502P-201ENST00000362419 108 ntBASIC-1.16□□□□□ -2.6
CHMP4AQ9BY43 RNU6-476P-201ENST00000384726 107 ntBASIC-1.16□□□□□ -2.6
CHMP4AQ9BY43 RNY1P9-201ENST00000532431 109 ntBASIC-1.17□□□□□ -2.6
CHMP4AQ9BY43 RNU6-659P-201ENST00000516454 104 ntBASIC-1.18□□□□□ -2.6
CHMP4AQ9BY43 RNU6-794P-201ENST00000517261 64 ntBASIC-1.18□□□□□ -2.6
CHMP4AQ9BY43 MIR4777-201ENST00000583710 86 ntBASIC-1.18□□□□□ -2.6
CHMP4AQ9BY43 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHMP4AQ9BY43 SNORA63.6-201ENST00000364921 119 ntBASIC-1.19□□□□□ -2.6
CHMP4AQ9BY43 MIR5704-201ENST00000584029 77 ntBASIC-1.19□□□□□ -2.6
CHMP4AQ9BY43 AC012531.4-201ENST00000616509 177 ntBASIC-1.19□□□□□ -2.6
CHMP4AQ9BY43 snoR1.1-201ENST00000628177 80 ntBASIC-1.19□□□□□ -2.6
CHMP4AQ9BY43 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.2□□□□□ -2.6
CHMP4AQ9BY43 RNU6-495P-201ENST00000362995 107 ntBASIC-1.2□□□□□ -2.6
CHMP4AQ9BY43 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.2□□□□□ -2.6
CHMP4AQ9BY43 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.2□□□□□ -2.6
CHMP4AQ9BY43 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.2□□□□□ -2.6
CHMP4AQ9BY43 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.21□□□□□ -2.6
CHMP4AQ9BY43 MIR6773-201ENST00000612812 74 ntBASIC-1.22□□□□□ -2.6
CHMP4AQ9BY43 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.23□□□□□ -2.61
CHMP4AQ9BY43 RNA5SP292-201ENST00000390974 118 ntBASIC-1.23□□□□□ -2.61
CHMP4AQ9BY43 SNORA13-201ENST00000458790 133 ntBASIC-1.23□□□□□ -2.61
CHMP4AQ9BY43 RNU6-412P-201ENST00000516434 106 ntBASIC-1.23□□□□□ -2.61
CHMP4AQ9BY43 RNU6-880P-201ENST00000384526 107 ntBASIC-1.24□□□□□ -2.61
CHMP4AQ9BY43 MIR518B-201ENST00000385127 83 ntBASIC-1.24□□□□□ -2.61
CHMP4AQ9BY43 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.24□□□□□ -2.61
CHMP4AQ9BY43 RNU6-990P-201ENST00000364385 104 ntBASIC-1.25□□□□□ -2.61
CHMP4AQ9BY43 RNA5SP266-201ENST00000410273 108 ntBASIC-1.25□□□□□ -2.61
CHMP4AQ9BY43 MTATP6P29-201ENST00000415057 132 ntBASIC-1.25□□□□□ -2.61
CHMP4AQ9BY43 RNU6-881P-201ENST00000516813 102 ntBASIC-1.25□□□□□ -2.61
CHMP4AQ9BY43 MIR6854-201ENST00000614935 69 ntBASIC-1.25□□□□□ -2.61
CHMP4AQ9BY43 RNU4-32P-201ENST00000363404 141 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 SNORA24B-201ENST00000384176 131 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 SNORD116-21-201ENST00000384507 92 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 RNU6-62P-201ENST00000516526 102 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 SNORA18.5-201ENST00000516616 101 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 MIR3179-1-201ENST00000578940 84 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 MIR3179-2-201ENST00000579107 84 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 MIR3179-3-201ENST00000579566 84 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 MIR3179-4-201ENST00000617599 84 ntBASIC-1.26□□□□□ -2.61
CHMP4AQ9BY43 SNORD75.2-201ENST00000408784 58 ntBASIC-1.27□□□□□ -2.61
CHMP4AQ9BY43 AC021146.9-201ENST00000512503 156 ntBASIC-1.27□□□□□ -2.61
CHMP4AQ9BY43 SCARNA23-201ENST00000516060 130 ntBASIC-1.27□□□□□ -2.61
CHMP4AQ9BY43 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 RNU6-972P-201ENST00000391208 107 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 SNORA19.1-201ENST00000410656 129 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.28□□□□□ -2.61
CHMP4AQ9BY43 SNORD116-14-201ENST00000383894 92 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD116-17-201ENST00000383929 92 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD116-15-201ENST00000384445 92 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD116-19-201ENST00000384729 92 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 RNY1P7-201ENST00000384743 110 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD90-201ENST00000391145 111 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD22.1-201ENST00000516331 125 ntBASIC-1.29□□□□□ -2.62
CHMP4AQ9BY43 SNORD58A-201ENST00000383875 65 ntBASIC-1.3□□□□□ -2.62
CHMP4AQ9BY43 RNU7-24P-201ENST00000458867 62 ntBASIC-1.3□□□□□ -2.62
CHMP4AQ9BY43 MIR8068-201ENST00000618032 68 ntBASIC-1.3□□□□□ -2.62
CHMP4AQ9BY43 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 MIRLET7B-201ENST00000385140 83 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 MIR548I1-201ENST00000408810 149 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 RNU6-721P-201ENST00000410155 105 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 RNU6-887P-201ENST00000410660 100 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 AC006254.2-201ENST00000603259 279 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 U6.96-201ENST00000636425 70 ntBASIC-1.31□□□□□ -2.62
CHMP4AQ9BY43 RNU6-337P-201ENST00000391243 106 ntBASIC-1.32□□□□□ -2.62
CHMP4AQ9BY43 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.32□□□□□ -2.62
CHMP4AQ9BY43 RNU6-904P-201ENST00000516206 101 ntBASIC-1.32□□□□□ -2.62
CHMP4AQ9BY43 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.33□□□□□ -2.62
CHMP4AQ9BY43 RNA5SP331-201ENST00000364986 107 ntBASIC-1.33□□□□□ -2.62
CHMP4AQ9BY43 MIR587-201ENST00000384845 96 ntBASIC-1.33□□□□□ -2.62
CHMP4AQ9BY43 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.33□□□□□ -2.62
CHMP4AQ9BY43 RNU5F-1-201ENST00000362507 117 ntBASIC-1.34□□□□□ -2.62
CHMP4AQ9BY43 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 286.9 ms