Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU6-135P-201ENST00000516769 101 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 MIR4639-201ENST00000584938 69 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 AC244669.1-204ENST00000621564 178 ntBASIC0.94□□□□□ -2.26
LRFN3Q9BTN0 SNORD18A-201ENST00000363753 72 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 MIR573-201ENST00000384964 99 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 MIR519E-201ENST00000385075 84 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 RNU6-871P-201ENST00000516122 100 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 RNU6-469P-201ENST00000516253 101 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.93□□□□□ -2.26
LRFN3Q9BTN0 RNU6-382P-201ENST00000365181 106 ntBASIC0.92□□□□□ -2.26
LRFN3Q9BTN0 RNU6-1241P-201ENST00000384536 107 ntBASIC0.92□□□□□ -2.26
LRFN3Q9BTN0 RNU6-634P-201ENST00000459134 106 ntBASIC0.92□□□□□ -2.26
LRFN3Q9BTN0 AC011195.1-201ENST00000578177 177 ntBASIC0.92□□□□□ -2.26
LRFN3Q9BTN0 MIR4773-1-201ENST00000637203 78 ntBASIC0.92□□□□□ -2.26
LRFN3Q9BTN0 RNU6-788P-201ENST00000390967 104 ntBASIC0.91□□□□□ -2.26
LRFN3Q9BTN0 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
LRFN3Q9BTN0 MIR3612-201ENST00000579753 87 ntBASIC0.91□□□□□ -2.26
LRFN3Q9BTN0 MIR3675-201ENST00000583661 73 ntBASIC0.91□□□□□ -2.26
LRFN3Q9BTN0 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
LRFN3Q9BTN0 MIR216B-201ENST00000390186 82 ntBASIC0.9□□□□□ -2.27
LRFN3Q9BTN0 SNORD41.1-201ENST00000391000 69 ntBASIC0.9□□□□□ -2.27
LRFN3Q9BTN0 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
LRFN3Q9BTN0 MIR3678-201ENST00000578455 94 ntBASIC0.9□□□□□ -2.27
LRFN3Q9BTN0 RNU6-726P-201ENST00000364680 107 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 MIR154-201ENST00000385243 84 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 AC244098.3-201ENST00000424803 96 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 RNU6-539P-201ENST00000516665 103 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 AC103810.9-201ENST00000606688 112 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 MIR548O2-201ENST00000616090 70 ntBASIC0.89□□□□□ -2.27
LRFN3Q9BTN0 RNU6-495P-201ENST00000362995 107 ntBASIC0.88□□□□□ -2.27
LRFN3Q9BTN0 SNORD115-31-201ENST00000365318 82 ntBASIC0.88□□□□□ -2.27
LRFN3Q9BTN0 MIR548L-201ENST00000408303 86 ntBASIC0.88□□□□□ -2.27
LRFN3Q9BTN0 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
LRFN3Q9BTN0 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
LRFN3Q9BTN0 RNU6-540P-201ENST00000384622 101 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 SNORD75.2-201ENST00000408784 58 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 AC093423.1-201ENST00000440817 142 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 RNU7-74P-201ENST00000459104 62 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 RNU6-274P-201ENST00000459566 107 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 RNU6-752P-201ENST00000516376 102 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 MIR4653-201ENST00000585107 83 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 MIR6835-201ENST00000621552 64 ntBASIC0.87□□□□□ -2.27
LRFN3Q9BTN0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 RNU6-590P-201ENST00000365039 107 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 RNU6-54P-201ENST00000365563 107 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 RNU7-24P-201ENST00000458867 62 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 NAMPTP3-201ENST00000569273 224 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 MIR4636-201ENST00000582271 80 ntBASIC0.86□□□□□ -2.27
LRFN3Q9BTN0 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 RNA5SP347-201ENST00000362445 119 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 SNORD45.1-201ENST00000363181 77 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 SNORA36.2-201ENST00000384004 127 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 RNU6-649P-201ENST00000384463 107 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 AL691482.2-201ENST00000457453 84 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 AC243829.3-201ENST00000622177 108 ntBASIC0.85□□□□□ -2.27
LRFN3Q9BTN0 SNORD115-22-201ENST00000364456 82 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 RNA5SP331-201ENST00000364986 107 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 RNU6V-201ENST00000384105 107 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 SNORD45A-201ENST00000384512 84 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 RNU6-269P-201ENST00000391077 97 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 SNORD30.1-201ENST00000391309 70 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
LRFN3Q9BTN0 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
LRFN3Q9BTN0 RNU1-141P-201ENST00000364623 158 ntBASIC0.83□□□□□ -2.28
LRFN3Q9BTN0 MT-TY-201ENST00000387409 66 ntBASIC0.83□□□□□ -2.28
LRFN3Q9BTN0 snoU13.19-201ENST00000459148 104 ntBASIC0.83□□□□□ -2.28
LRFN3Q9BTN0 MIR6828-201ENST00000636181 60 ntBASIC0.83□□□□□ -2.28
LRFN3Q9BTN0 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 RNU6-1039P-201ENST00000383931 107 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 RNU6-604P-201ENST00000390917 100 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 RNU6-663P-201ENST00000391105 106 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 SNORD42B-201ENST00000458893 67 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 MIR4460-201ENST00000577862 86 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 MIR8053-201ENST00000613344 75 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 MIR6509-201ENST00000614603 85 ntBASIC0.82□□□□□ -2.28
LRFN3Q9BTN0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 SNORA8.2-201ENST00000384372 139 ntBASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 U6.111-201ENST00000636093 83 ntBASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 MIR6759-201ENST00000638110 65 ntBASIC0.81□□□□□ -2.28
LRFN3Q9BTN0 RNU6-895P-201ENST00000384125 103 ntBASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 MIR203A-201ENST00000384836 110 ntBASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 RNA5SP484-201ENST00000458857 111 ntBASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 RNU6-881P-201ENST00000516813 102 ntBASIC0.8□□□□□ -2.28
LRFN3Q9BTN0 SNORD113.1-201ENST00000363280 73 ntBASIC0.79□□□□□ -2.28
LRFN3Q9BTN0 Y_RNA.386-201ENST00000383913 105 ntBASIC0.79□□□□□ -2.28
LRFN3Q9BTN0 RNU6-800P-201ENST00000384473 103 ntBASIC0.79□□□□□ -2.28
LRFN3Q9BTN0 RNA5SP227-201ENST00000516184 113 ntBASIC0.79□□□□□ -2.28
LRFN3Q9BTN0 RNA5SP268-201ENST00000516828 124 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms