Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.81□□□□□ -2.54
ITCHQ96J02 SNORD114-3-201ENST00000364969 75 ntBASIC-0.81□□□□□ -2.54
ITCHQ96J02 RNU6-476P-201ENST00000384726 107 ntBASIC-0.81□□□□□ -2.54
ITCHQ96J02 MIR196A1-201ENST00000388006 70 ntBASIC-0.82□□□□□ -2.54
ITCHQ96J02 RNU7-85P-201ENST00000458851 63 ntBASIC-0.82□□□□□ -2.54
ITCHQ96J02 AC097510.1-201ENST00000510945 133 ntBASIC-0.82□□□□□ -2.54
ITCHQ96J02 FGF7P7-201ENST00000514120 227 ntBASIC-0.82□□□□□ -2.54
ITCHQ96J02 AL513043.2-201ENST00000573941 143 ntBASIC-0.82□□□□□ -2.54
ITCHQ96J02 SNORA40-201ENST00000388090 126 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 RNU6-721P-201ENST00000410155 105 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 SNORD42B-201ENST00000458893 67 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 SNORD22.1-201ENST00000516331 125 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 RNU6-719P-201ENST00000516671 104 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 MIR4439-201ENST00000583746 80 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 snoR1.1-201ENST00000628177 80 ntBASIC-0.83□□□□□ -2.54
ITCHQ96J02 RNU4-36P-201ENST00000364294 144 ntBASIC-0.84□□□□□ -2.54
ITCHQ96J02 AC022137.1-201ENST00000483735 151 ntBASIC-0.84□□□□□ -2.54
ITCHQ96J02 AC068339.1-201ENST00000526965 141 ntBASIC-0.84□□□□□ -2.54
ITCHQ96J02 MIR5704-201ENST00000584029 77 ntBASIC-0.84□□□□□ -2.54
ITCHQ96J02 SNORD114-25-201ENST00000363742 72 ntBASIC-0.85□□□□□ -2.55
ITCHQ96J02 SNORD83B-201ENST00000386745 93 ntBASIC-0.85□□□□□ -2.55
ITCHQ96J02 MIR6854-201ENST00000614935 69 ntBASIC-0.85□□□□□ -2.55
ITCHQ96J02 SNORD45B-201ENST00000364617 72 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 MIR517B-201ENST00000385102 67 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 MIR548U-201ENST00000390728 81 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 AP000533.3-201ENST00000447704 118 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 RNU7-200P-201ENST00000516105 62 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 MIR3613-201ENST00000579844 87 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 MIR3165-201ENST00000579874 75 ntBASIC-0.86□□□□□ -2.55
ITCHQ96J02 RNU6-132P-201ENST00000383863 107 ntBASIC-0.87□□□□□ -2.55
ITCHQ96J02 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.87□□□□□ -2.55
ITCHQ96J02 RNU6-257P-201ENST00000410238 98 ntBASIC-0.87□□□□□ -2.55
ITCHQ96J02 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.87□□□□□ -2.55
ITCHQ96J02 MIR8068-201ENST00000618032 68 ntBASIC-0.87□□□□□ -2.55
ITCHQ96J02 MIR365A-201ENST00000362260 87 ntBASIC-0.88□□□□□ -2.55
ITCHQ96J02 SNORA63.2-201ENST00000362603 126 ntBASIC-0.88□□□□□ -2.55
ITCHQ96J02 RNA5SP192-201ENST00000364404 120 ntBASIC-0.88□□□□□ -2.55
ITCHQ96J02 SNORD74.6-201ENST00000364796 70 ntBASIC-0.88□□□□□ -2.55
ITCHQ96J02 RNU6-644P-201ENST00000391155 98 ntBASIC-0.88□□□□□ -2.55
ITCHQ96J02 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 RNU6-24P-201ENST00000384440 107 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 RNU6-813P-201ENST00000384691 107 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 RNU7-107P-201ENST00000459121 61 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 MIR5009-201ENST00000578736 100 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 AC103810.7-201ENST00000607821 91 ntBASIC-0.89□□□□□ -2.55
ITCHQ96J02 MIR3064-201ENST00000581130 66 ntBASIC-0.9□□□□□ -2.55
ITCHQ96J02 MIR6773-201ENST00000612812 74 ntBASIC-0.9□□□□□ -2.55
ITCHQ96J02 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 SNORA63.6-201ENST00000364921 119 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.91□□□□□ -2.56
ITCHQ96J02 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 RNU6-592P-201ENST00000411333 103 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 SNORD18.2-201ENST00000459604 70 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 MIR3140-201ENST00000583685 90 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 AC104996.3-201ENST00000590718 94 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 MIR3914-2-201ENST00000637339 95 ntBASIC-0.91□□□□□ -2.56
ITCHQ96J02 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 RNU6-495P-201ENST00000362995 107 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 MIR548A1-201ENST00000385041 97 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 SNORD4B-201ENST00000459083 72 ntBASIC-0.92□□□□□ -2.56
ITCHQ96J02 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 SNORD115-23-201ENST00000364461 82 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 RNU6-337P-201ENST00000391243 106 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 RNU6-971P-201ENST00000516920 106 ntBASIC-0.93□□□□□ -2.56
ITCHQ96J02 RNU6-905P-201ENST00000384434 107 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 MIRLET7B-201ENST00000385140 83 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 RNU6-519P-201ENST00000410590 108 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 SNORD33.1-201ENST00000516213 88 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 MIR4441-201ENST00000582623 100 ntBASIC-0.94□□□□□ -2.56
ITCHQ96J02 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 SNORA24B-201ENST00000384176 131 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 MIR548A3-201ENST00000385297 97 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 MIR1285-2-201ENST00000408311 88 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 MIR548Z-201ENST00000584743 97 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 U6.95-201ENST00000636931 70 ntBASIC-0.95□□□□□ -2.56
ITCHQ96J02 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 RNY1P5-201ENST00000383890 115 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 RNU6-80P-201ENST00000384195 107 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 RNU6-346P-201ENST00000516288 111 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 RNU6-62P-201ENST00000516526 102 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 AC140658.3-201ENST00000567603 271 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 MIR4777-201ENST00000583710 86 ntBASIC-0.96□□□□□ -2.56
ITCHQ96J02 uc_338.19-201ENST00000616808 99 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms