Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 RNA5SP484-201ENST00000458857 111 ntBASIC1.96□□□□□ -2.1
LRCH3Q96II8 RNA5SP47-201ENST00000517230 109 ntBASIC1.96□□□□□ -2.1
LRCH3Q96II8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.96□□□□□ -2.1
LRCH3Q96II8 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
LRCH3Q96II8 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.96□□□□□ -2.1
LRCH3Q96II8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LRCH3Q96II8 MIR96-201ENST00000362288 78 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 RNU6-35P-201ENST00000384530 107 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 MIR4448-201ENST00000584360 86 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.95□□□□□ -2.1
LRCH3Q96II8 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.95□□□□□ -2.1
LRCH3Q96II8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LRCH3Q96II8 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LRCH3Q96II8 Y_RNA.325-201ENST00000365171 122 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 SNORA8.2-201ENST00000384372 139 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 MIR758-201ENST00000390227 88 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LRCH3Q96II8 MIR676-201ENST00000390702 67 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 RNU6-231P-201ENST00000517122 103 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 MIR4422-201ENST00000581938 83 ntBASIC1.94□□□□□ -2.1
LRCH3Q96II8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRCH3Q96II8 Y_RNA.246-201ENST00000364495 108 ntBASIC1.93□□□□□ -2.1
LRCH3Q96II8 SNORA70.22-201ENST00000517160 124 ntBASIC1.93□□□□□ -2.1
LRCH3Q96II8 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.93□□□□□ -2.1
LRCH3Q96II8 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
LRCH3Q96II8 SNORA63.6-201ENST00000364921 119 ntBASIC1.92□□□□□ -2.1
LRCH3Q96II8 RNU6-1246P-201ENST00000391064 107 ntBASIC1.92□□□□□ -2.1
LRCH3Q96II8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
LRCH3Q96II8 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRCH3Q96II8 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
LRCH3Q96II8 MIR4255-201ENST00000579351 72 ntBASIC1.91□□□□□ -2.1
LRCH3Q96II8 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.91□□□□□ -2.1
LRCH3Q96II8 SNORA9.1-201ENST00000362412 131 ntBASIC1.9□□□□□ -2.11
LRCH3Q96II8 SCARNA17.3-201ENST00000516381 125 ntBASIC1.9□□□□□ -2.11
LRCH3Q96II8 MIR582-201ENST00000365731 98 ntBASIC1.89□□□□□ -2.11
LRCH3Q96II8 MIR652-201ENST00000385278 98 ntBASIC1.89□□□□□ -2.11
LRCH3Q96II8 SNORD12-201ENST00000391002 90 ntBASIC1.89□□□□□ -2.11
LRCH3Q96II8 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
LRCH3Q96II8 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
LRCH3Q96II8 AC002429.1-201ENST00000437672 148 ntBASIC1.88□□□□□ -2.11
LRCH3Q96II8 AC008834.1-201ENST00000511612 175 ntBASIC1.88□□□□□ -2.11
LRCH3Q96II8 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
LRCH3Q96II8 RNU4-33P-201ENST00000364316 85 ntBASIC1.87□□□□□ -2.11
LRCH3Q96II8 SNORD89-201ENST00000390981 114 ntBASIC1.87□□□□□ -2.11
LRCH3Q96II8 RNU1-92P-201ENST00000517017 135 ntBASIC1.87□□□□□ -2.11
LRCH3Q96II8 MIR3678-201ENST00000578455 94 ntBASIC1.87□□□□□ -2.11
LRCH3Q96II8 uc_338.20-201ENST00000621563 178 ntBASIC1.87□□□□□ -2.11
LRCH3Q96II8 Y_RNA.407-201ENST00000383986 113 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 SNORD105-201ENST00000386910 85 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 RNU6-930P-201ENST00000390938 100 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 SNORD116.2-201ENST00000391251 93 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 MIR548E-201ENST00000408287 88 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 RPS29P1-201ENST00000465274 159 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 MIR548AE1-201ENST00000583292 70 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 AL162376.1-201ENST00000624117 175 ntBASIC1.86□□□□□ -2.11
LRCH3Q96II8 SNORA25.8-201ENST00000364831 128 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 MIR520E-201ENST00000384867 87 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 U7.7-201ENST00000459276 60 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 SNORA40.16-201ENST00000517238 121 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 SNORD53B-201ENST00000577887 78 ntBASIC1.85□□□□□ -2.11
LRCH3Q96II8 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
LRCH3Q96II8 RNA5SP61-201ENST00000516453 100 ntBASIC1.84□□□□□ -2.11
LRCH3Q96II8 RNU6-1110P-201ENST00000516462 101 ntBASIC1.84□□□□□ -2.11
LRCH3Q96II8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
LRCH3Q96II8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRCH3Q96II8 MIR222-201ENST00000384992 110 ntBASIC1.83□□□□□ -2.12
LRCH3Q96II8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
LRCH3Q96II8 RNU1-93P-201ENST00000364704 169 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 SNORD116-16-201ENST00000384533 92 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 RNA5SP436-201ENST00000516020 115 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 CYP3A54P-201ENST00000566950 75 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 MIR4473-201ENST00000583731 91 ntBASIC1.82□□□□□ -2.12
LRCH3Q96II8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LRCH3Q96II8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
LRCH3Q96II8 MIR3612-201ENST00000579753 87 ntBASIC1.8□□□□□ -2.12
LRCH3Q96II8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
LRCH3Q96II8 MIR573-201ENST00000384964 99 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
LRCH3Q96II8 MIR548F3-201ENST00000408509 87 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 AL021921.1-201ENST00000442774 93 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 MIR151B-201ENST00000584249 96 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 MIR7110-201ENST00000612638 86 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 AL353770.2-201ENST00000620024 78 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 AC090617.8-201ENST00000623339 167 ntBASIC1.79□□□□□ -2.12
LRCH3Q96II8 Y_RNA.74-201ENST00000362911 99 ntBASIC1.78□□□□□ -2.12
LRCH3Q96II8 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
LRCH3Q96II8 RNU6-518P-201ENST00000516056 96 ntBASIC1.78□□□□□ -2.12
LRCH3Q96II8 MIR6828-201ENST00000636181 60 ntBASIC1.78□□□□□ -2.12
LRCH3Q96II8 U6.96-201ENST00000636425 70 ntBASIC1.78□□□□□ -2.12
LRCH3Q96II8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
LRCH3Q96II8 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
LRCH3Q96II8 SNORA67.6-201ENST00000391093 99 ntBASIC1.77□□□□□ -2.13
LRCH3Q96II8 AC006210.1-201ENST00000424882 111 ntBASIC1.77□□□□□ -2.13
LRCH3Q96II8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms