Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 RNU6-795P-201ENST00000516323 103 ntBASIC-0.61□□□□□ -2.51
SNRNP48Q6IEG0 SNORD114-4-201ENST00000363962 75 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 SNORD116-14-201ENST00000383894 92 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 SNORD116-17-201ENST00000383929 92 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 SNORD116-15-201ENST00000384445 92 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 SNORD116-19-201ENST00000384729 92 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-900P-201ENST00000384498 102 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 SNORD4B-201ENST00000459083 72 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 MIR3064-201ENST00000581130 66 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 MIR4432-201ENST00000581823 84 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 AC145423.2-201ENST00000610631 239 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 AC012531.4-201ENST00000616509 177 ntBASIC-0.63□□□□□ -2.51
SNRNP48Q6IEG0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.64□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-774P-201ENST00000363238 107 ntBASIC-0.64□□□□□ -2.51
SNRNP48Q6IEG0 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.64□□□□□ -2.51
SNRNP48Q6IEG0 MIR548U-201ENST00000390728 81 ntBASIC-0.64□□□□□ -2.51
SNRNP48Q6IEG0 MIR548E-201ENST00000408287 88 ntBASIC-0.64□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-704P-201ENST00000364162 103 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 SNORD116-21-201ENST00000384507 92 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 RNU6-880P-201ENST00000384526 107 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 MIR3681-201ENST00000580089 72 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 MIR3668-201ENST00000582138 75 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 MIR3140-201ENST00000583685 90 ntBASIC-0.65□□□□□ -2.51
SNRNP48Q6IEG0 SNORA63.2-201ENST00000362603 126 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 MIR587-201ENST00000384845 96 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 SNORD2-201ENST00000459163 69 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-412P-201ENST00000516434 106 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 MIR4436A-201ENST00000585278 85 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 AC104996.3-201ENST00000590718 94 ntBASIC-0.66□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-519P-201ENST00000410590 108 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 SNORA19.1-201ENST00000410656 129 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 AC097510.1-201ENST00000510945 133 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 RNA5SP169-201ENST00000517268 117 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 U4.2-201ENST00000618561 85 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 MIR4320-201ENST00000636981 65 ntBASIC-0.67□□□□□ -2.52
SNRNP48Q6IEG0 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.68□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
SNRNP48Q6IEG0 AL445193.1-201ENST00000441183 141 ntBASIC-0.68□□□□□ -2.52
SNRNP48Q6IEG0 RNU7-55P-201ENST00000459426 62 ntBASIC-0.68□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-746P-201ENST00000384112 109 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 SNORD56B-201ENST00000384713 71 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 snoU13.13-201ENST00000458842 104 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 SCARNA23-201ENST00000516060 130 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 AC093726.3-201ENST00000637588 150 ntBASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.69□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-904P-201ENST00000516206 101 ntBASIC-0.7□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-495P-201ENST00000362995 107 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 RNA5SP292-201ENST00000390974 118 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 MIR4280-201ENST00000582178 76 ntBASIC-0.71□□□□□ -2.52
SNRNP48Q6IEG0 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.72□□□□□ -2.52
SNRNP48Q6IEG0 SNORD58A-201ENST00000383875 65 ntBASIC-0.72□□□□□ -2.52
SNRNP48Q6IEG0 SNORA24B-201ENST00000384176 131 ntBASIC-0.72□□□□□ -2.52
SNRNP48Q6IEG0 RNU6-972P-201ENST00000391208 107 ntBASIC-0.72□□□□□ -2.52
SNRNP48Q6IEG0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.72□□□□□ -2.52
SNRNP48Q6IEG0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-959P-201ENST00000384671 107 ntBASIC-0.73□□□□□ -2.53
SNRNP48Q6IEG0 SNORA18.5-201ENST00000516616 101 ntBASIC-0.73□□□□□ -2.53
SNRNP48Q6IEG0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.73□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-476P-201ENST00000384726 107 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 SNORD90-201ENST00000391145 111 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 MIR1207-201ENST00000408249 87 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-887P-201ENST00000410660 100 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-62P-201ENST00000516526 102 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.74□□□□□ -2.53
SNRNP48Q6IEG0 MT-TR-201ENST00000387439 65 ntBASIC-0.76□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-973P-201ENST00000364690 107 ntBASIC-0.77□□□□□ -2.53
SNRNP48Q6IEG0 MIR204-201ENST00000385200 110 ntBASIC-0.77□□□□□ -2.53
SNRNP48Q6IEG0 SNORD38.3-201ENST00000516599 73 ntBASIC-0.77□□□□□ -2.53
SNRNP48Q6IEG0 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 MIR590-201ENST00000385008 97 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 MIR1302-5-201ENST00000408164 150 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 SNORD75.2-201ENST00000408784 58 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 MTATP6P29-201ENST00000415057 132 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 AC008267.6-201ENST00000441664 139 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 RNU7-24P-201ENST00000458867 62 ntBASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.78□□□□□ -2.53
SNRNP48Q6IEG0 RNU6-537P-201ENST00000517277 103 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 246.6 ms