Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 SNORA17.3-201ENST00000391159 129 ntBASIC2.14□□□□□ -2.07
VARS2Q5ST30 AC012493.3-201ENST00000604494 112 ntBASIC2.14□□□□□ -2.07
VARS2Q5ST30 AL162376.1-201ENST00000624117 175 ntBASIC2.14□□□□□ -2.07
VARS2Q5ST30 MIR579-201ENST00000385221 98 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 AL356379.1-201ENST00000414105 126 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 TRMT112P2-201ENST00000512910 132 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 RNA5SP182-201ENST00000516064 82 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 RN7SKP88-201ENST00000516847 250 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.13□□□□□ -2.07
VARS2Q5ST30 7SK.8-201ENST00000612110 250 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 AC243829.6-201ENST00000612652 106 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 7SK.13-201ENST00000622040 250 ntBASIC2.13□□□□□ -2.07
VARS2Q5ST30 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VARS2Q5ST30 snoU13.18-201ENST00000459483 104 ntBASIC2.12□□□□□ -2.07
VARS2Q5ST30 RNU6-742P-201ENST00000365289 107 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 RNU6-458P-201ENST00000384179 107 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 RNA5SP338-201ENST00000410495 85 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 AL451105.1-201ENST00000450005 189 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 SNORD79.1-201ENST00000516069 84 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 RNU7-154P-201ENST00000516194 62 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 U6.58-201ENST00000613107 107 ntBASIC2.11□□□□□ -2.07
VARS2Q5ST30 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.11□□□□□ -2.07
VARS2Q5ST30 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.1□□□□□ -2.07
VARS2Q5ST30 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
VARS2Q5ST30 RNU6-721P-201ENST00000410155 105 ntBASIC2.1□□□□□ -2.07
VARS2Q5ST30 RNU7-151P-201ENST00000516930 53 ntBASIC2.1□□□□□ -2.07
VARS2Q5ST30 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.1□□□□□ -2.07
VARS2Q5ST30 MIR4448-201ENST00000584360 86 ntBASIC2.1□□□□□ -2.07
VARS2Q5ST30 AC138207.3-201ENST00000585289 166 ntBASIC2.1□□□□□ -2.07
VARS2Q5ST30 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VARS2Q5ST30 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
VARS2Q5ST30 RNU6-910P-201ENST00000390844 107 ntBASIC2.09□□□□□ -2.07
VARS2Q5ST30 RNA5SP233-201ENST00000459153 113 ntBASIC2.09□□□□□ -2.07
VARS2Q5ST30 SCARNA16.5-201ENST00000517114 183 ntBASIC2.09□□□□□ -2.07
VARS2Q5ST30 MIR329-2-201ENST00000385029 84 ntBASIC2.08□□□□□ -2.08
VARS2Q5ST30 MIR30A-201ENST00000385092 71 ntBASIC2.08□□□□□ -2.08
VARS2Q5ST30 MIR4473-201ENST00000583731 91 ntBASIC2.08□□□□□ -2.08
VARS2Q5ST30 RNU6-717P-201ENST00000459076 104 ntBASIC2.07□□□□□ -2.08
VARS2Q5ST30 U7.7-201ENST00000459276 60 ntBASIC2.07□□□□□ -2.08
VARS2Q5ST30 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VARS2Q5ST30 SNORD115-25-201ENST00000362619 82 ntBASIC2.06□□□□□ -2.08
VARS2Q5ST30 RNA5SP160-201ENST00000364866 120 ntBASIC2.06□□□□□ -2.08
VARS2Q5ST30 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.06□□□□□ -2.08
VARS2Q5ST30 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU6-598P-201ENST00000364017 105 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU6-828P-201ENST00000364876 107 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU6-59P-201ENST00000384787 107 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU1-40P-201ENST00000516816 164 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU1-97P-201ENST00000516872 164 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 RNU1-92P-201ENST00000517017 135 ntBASIC2.05□□□□□ -2.08
VARS2Q5ST30 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VARS2Q5ST30 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
VARS2Q5ST30 RNA5SP190-201ENST00000365222 118 ntBASIC2.04□□□□□ -2.08
VARS2Q5ST30 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.04□□□□□ -2.08
VARS2Q5ST30 AP1B1P2-201ENST00000416196 106 ntBASIC2.04□□□□□ -2.08
VARS2Q5ST30 MIR4299-201ENST00000577899 72 ntBASIC2.04□□□□□ -2.08
VARS2Q5ST30 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VARS2Q5ST30 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
VARS2Q5ST30 MIR125B1-201ENST00000385236 88 ntBASIC2.03□□□□□ -2.08
VARS2Q5ST30 AC006210.1-201ENST00000424882 111 ntBASIC2.03□□□□□ -2.08
VARS2Q5ST30 AC003989.2-201ENST00000440224 169 ntBASIC2.03□□□□□ -2.08
VARS2Q5ST30 MIR3678-201ENST00000578455 94 ntBASIC2.03□□□□□ -2.08
VARS2Q5ST30 U2.18-201ENST00000622185 84 ntBASIC2.03□□□□□ -2.08
VARS2Q5ST30 RNU6-337P-201ENST00000391243 106 ntBASIC2.02□□□□□ -2.09
VARS2Q5ST30 SNORD13-201ENST00000459299 104 ntBASIC2.02□□□□□ -2.09
VARS2Q5ST30 RNA5SP94-201ENST00000516917 108 ntBASIC2.02□□□□□ -2.09
VARS2Q5ST30 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
VARS2Q5ST30 RNU6-945P-201ENST00000383947 107 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VARS2Q5ST30 SNORD110-201ENST00000408189 75 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 SNORA25.15-201ENST00000516487 89 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 AC025627.3-201ENST00000582078 182 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 MIR6828-201ENST00000636181 60 ntBASIC2.01□□□□□ -2.09
VARS2Q5ST30 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
VARS2Q5ST30 RNU6-1008P-201ENST00000384160 104 ntBASIC2□□□□□ -2.09
VARS2Q5ST30 RNU4-62P-201ENST00000410125 130 ntBASIC2□□□□□ -2.09
VARS2Q5ST30 RNA5SP470-201ENST00000516463 106 ntBASIC2□□□□□ -2.09
VARS2Q5ST30 uc_338.20-201ENST00000621563 178 ntBASIC2□□□□□ -2.09
VARS2Q5ST30 MIR548H4-201ENST00000408689 111 ntBASIC1.99□□□□□ -2.09
VARS2Q5ST30 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.99□□□□□ -2.09
VARS2Q5ST30 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VARS2Q5ST30 MIR9-3-201ENST00000385084 90 ntBASIC1.98□□□□□ -2.09
VARS2Q5ST30 AC244090.1-201ENST00000441884 93 ntBASIC1.98□□□□□ -2.09
VARS2Q5ST30 SNORD12-201ENST00000391002 90 ntBASIC1.96□□□□□ -2.1
VARS2Q5ST30 BX248123.2-201ENST00000606318 124 ntBASIC1.96□□□□□ -2.1
VARS2Q5ST30 MIR6773-201ENST00000612812 74 ntBASIC1.96□□□□□ -2.1
VARS2Q5ST30 AC084768.2-201ENST00000622736 221 ntBASIC1.96□□□□□ -2.1
VARS2Q5ST30 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.96□□□□□ -2.1
VARS2Q5ST30 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
VARS2Q5ST30 MIR20A-201ENST00000362279 71 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 SNORD105-201ENST00000386910 85 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 RNU6-995P-201ENST00000391244 107 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 RNU1-78P-201ENST00000391248 165 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 RNU6-1110P-201ENST00000516462 101 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
VARS2Q5ST30 MIR548AA1-201ENST00000384971 97 ntBASIC1.94□□□□□ -2.1
VARS2Q5ST30 MIR29B1-201ENST00000385015 81 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms