Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 AC010487.4-201ENST00000637027 61 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU5F-1-201ENST00000362507 117 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP457-201ENST00000363657 124 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU6-382P-201ENST00000365181 106 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU6-110P-201ENST00000384508 104 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 MIR617-201ENST00000385030 97 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU6-788P-201ENST00000390967 104 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 SNORD41.1-201ENST00000391000 69 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU6-634P-201ENST00000459134 106 ntBASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
SLC44A4Q53GD3 RNU4-45P-201ENST00000365469 141 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 SNORA8.1-201ENST00000384250 140 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 MIR140-201ENST00000385282 100 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 RNU6-587P-201ENST00000391282 106 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 MIR1265-201ENST00000408444 86 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 SNORD42B-201ENST00000458893 67 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP94-201ENST00000516917 108 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 SCARNA16.5-201ENST00000517114 183 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 NAMPTP3-201ENST00000569273 224 ntBASIC0.75□□□□□ -2.29
SLC44A4Q53GD3 SNORD115-22-201ENST00000364456 82 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 Y_RNA.264-201ENST00000364665 102 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 RNU6-54P-201ENST00000365563 107 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 SNORD45A-201ENST00000384512 84 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 RNU6-269P-201ENST00000391077 97 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 AC097510.1-201ENST00000510945 133 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 AL109933.3-201ENST00000619095 188 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
SLC44A4Q53GD3 RNU6-1177P-201ENST00000391058 104 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 U3.27-201ENST00000391237 200 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP193-201ENST00000410353 107 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 RNU2-59P-201ENST00000410482 191 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 AC093423.1-201ENST00000440817 142 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 RNU6-539P-201ENST00000516665 103 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 RNU6-807P-201ENST00000516805 107 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 MIR6828-201ENST00000636181 60 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 MIR4773-1-201ENST00000637203 78 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 MIR1297-201ENST00000637311 77 ntBASIC0.73□□□□□ -2.29
SLC44A4Q53GD3 SNORD116-24-201ENST00000384549 92 ntBASIC0.72□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP227-201ENST00000516184 113 ntBASIC0.72□□□□□ -2.29
SLC44A4Q53GD3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.72□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP268-201ENST00000516828 124 ntBASIC0.72□□□□□ -2.29
SLC44A4Q53GD3 RNA5SP347-201ENST00000362445 119 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 MIR203A-201ENST00000384836 110 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 MIR4711-201ENST00000578274 70 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 MIR3675-201ENST00000583661 73 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 MIR548O2-201ENST00000616090 70 ntBASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.71□□□□□ -2.3
SLC44A4Q53GD3 RNU6-495P-201ENST00000362995 107 ntBASIC0.7□□□□□ -2.3
SLC44A4Q53GD3 RNU6-604P-201ENST00000390917 100 ntBASIC0.7□□□□□ -2.3
SLC44A4Q53GD3 RNU6-982P-201ENST00000516216 102 ntBASIC0.7□□□□□ -2.3
SLC44A4Q53GD3 MIR7107-201ENST00000611489 80 ntBASIC0.7□□□□□ -2.3
SLC44A4Q53GD3 SNORD45.1-201ENST00000363181 77 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU6-990P-201ENST00000364385 104 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNA5SP517-201ENST00000364724 117 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU6V-201ENST00000384105 107 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU6-380P-201ENST00000410207 107 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU7-74P-201ENST00000459104 62 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNA5SP330-201ENST00000517096 96 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
SLC44A4Q53GD3 RNU1-141P-201ENST00000364623 158 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 MIR154-201ENST00000385243 84 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 RNA5SP484-201ENST00000458857 111 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 AC005520.4-201ENST00000604337 90 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 AL162376.1-201ENST00000624117 175 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 U6.111-201ENST00000636093 83 ntBASIC0.68□□□□□ -2.3
SLC44A4Q53GD3 SNORD113.1-201ENST00000363280 73 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 SNORA8.2-201ENST00000384372 139 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 RNU6-800P-201ENST00000384473 103 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 SNORD30.1-201ENST00000391309 70 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 SNORD75.2-201ENST00000408784 58 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 RNU5B-6P-201ENST00000516765 68 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 MIR4460-201ENST00000577862 86 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 MIR4752-201ENST00000579672 72 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 SNORA25.18-201ENST00000607153 114 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 AC092634.7-201ENST00000621022 103 ntBASIC0.67□□□□□ -2.3
SLC44A4Q53GD3 RNU6-590P-201ENST00000365039 107 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 RNU6-649P-201ENST00000384463 107 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 MT-TY-201ENST00000387409 66 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 MIR216B-201ENST00000390186 82 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 RNU6-663P-201ENST00000391105 106 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 RNU1-29P-201ENST00000606574 126 ntBASIC0.66□□□□□ -2.3
SLC44A4Q53GD3 MIR9-2-201ENST00000384838 87 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 AC069271.1-201ENST00000445577 156 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 RNU7-24P-201ENST00000458867 62 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 RNU6-881P-201ENST00000516813 102 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
SLC44A4Q53GD3 RNU6-681P-201ENST00000364012 104 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.64□□□□□ -2.31
SLC44A4Q53GD3 RNU6-871P-201ENST00000516122 100 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms