Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RNU6-838P-201ENST00000363399 108 ntBASIC1.89□□□□□ -2.11
CTC1Q2NKJ3 MIR758-201ENST00000390227 88 ntBASIC1.89□□□□□ -2.11
CTC1Q2NKJ3 RNU7-21P-201ENST00000459430 62 ntBASIC1.89□□□□□ -2.11
CTC1Q2NKJ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 SNORA63.6-201ENST00000364921 119 ntBASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 RNU6-392P-201ENST00000364926 101 ntBASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 SNORA40B-201ENST00000385573 128 ntBASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
CTC1Q2NKJ3 SNORD116-16-201ENST00000384533 92 ntBASIC1.87□□□□□ -2.11
CTC1Q2NKJ3 SNORD28-201ENST00000384706 75 ntBASIC1.87□□□□□ -2.11
CTC1Q2NKJ3 RNA5SP484-201ENST00000458857 111 ntBASIC1.87□□□□□ -2.11
CTC1Q2NKJ3 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
CTC1Q2NKJ3 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
CTC1Q2NKJ3 RNU6-724P-201ENST00000390958 105 ntBASIC1.86□□□□□ -2.11
CTC1Q2NKJ3 RNU6-269P-201ENST00000391077 97 ntBASIC1.86□□□□□ -2.11
CTC1Q2NKJ3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
CTC1Q2NKJ3 MIR4639-201ENST00000584938 69 ntBASIC1.86□□□□□ -2.11
CTC1Q2NKJ3 RNU6-726P-201ENST00000364680 107 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 MIR582-201ENST00000365731 98 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 AC002350.1-201ENST00000490759 375 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 CYP3A54P-201ENST00000566950 75 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 MIR6504-201ENST00000613520 61 ntBASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CTC1Q2NKJ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 MIR527-201ENST00000385244 85 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 MIR652-201ENST00000385278 98 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 RNU7-90P-201ENST00000459216 62 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 RNU6-518P-201ENST00000516056 96 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 RNU6-469P-201ENST00000516253 101 ntBASIC1.84□□□□□ -2.11
CTC1Q2NKJ3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.83□□□□□ -2.12
CTC1Q2NKJ3 SNORA80D-201ENST00000384488 135 ntBASIC1.83□□□□□ -2.12
CTC1Q2NKJ3 Y_RNA.282-201ENST00000364793 102 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 MIR1827-201ENST00000408549 66 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 RNU6-172P-201ENST00000411000 93 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 MIR4285-201ENST00000581001 85 ntBASIC1.82□□□□□ -2.12
CTC1Q2NKJ3 Y_RNA.74-201ENST00000362911 99 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 SNORA16.1-201ENST00000364597 132 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 MIR548E-201ENST00000408287 88 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 AC090617.8-201ENST00000623339 167 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 U6.96-201ENST00000636425 70 ntBASIC1.81□□□□□ -2.12
CTC1Q2NKJ3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CTC1Q2NKJ3 MIR517C-201ENST00000385103 95 ntBASIC1.8□□□□□ -2.12
CTC1Q2NKJ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
CTC1Q2NKJ3 RNU6-135P-201ENST00000516769 101 ntBASIC1.8□□□□□ -2.12
CTC1Q2NKJ3 MIR548AE1-201ENST00000583292 70 ntBASIC1.8□□□□□ -2.12
CTC1Q2NKJ3 SNORD1B-201ENST00000363091 84 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 SNORD18A-201ENST00000363753 72 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 SNORA8.2-201ENST00000384372 139 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 RNU6-1250P-201ENST00000391218 107 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 AL021921.1-201ENST00000442774 93 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 MIR4490-201ENST00000582647 84 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 MIR4473-201ENST00000583731 91 ntBASIC1.79□□□□□ -2.12
CTC1Q2NKJ3 RNU6-986P-201ENST00000363133 102 ntBASIC1.78□□□□□ -2.12
CTC1Q2NKJ3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.78□□□□□ -2.12
CTC1Q2NKJ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.78□□□□□ -2.12
CTC1Q2NKJ3 RNA5SP47-201ENST00000517230 109 ntBASIC1.78□□□□□ -2.12
CTC1Q2NKJ3 RNU6-247P-201ENST00000362636 107 ntBASIC1.77□□□□□ -2.13
CTC1Q2NKJ3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CTC1Q2NKJ3 MIR519A2-201ENST00000384990 87 ntBASIC1.76□□□□□ -2.13
CTC1Q2NKJ3 MIR548AG1-201ENST00000579932 66 ntBASIC1.76□□□□□ -2.13
CTC1Q2NKJ3 RNU6-246P-201ENST00000384702 107 ntBASIC1.75□□□□□ -2.13
CTC1Q2NKJ3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.75□□□□□ -2.13
CTC1Q2NKJ3 MIR1255B2-201ENST00000408618 67 ntBASIC1.75□□□□□ -2.13
CTC1Q2NKJ3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
CTC1Q2NKJ3 RNU6-419P-201ENST00000517030 63 ntBASIC1.75□□□□□ -2.13
CTC1Q2NKJ3 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
CTC1Q2NKJ3 MIR516B1-201ENST00000385211 90 ntBASIC1.74□□□□□ -2.13
CTC1Q2NKJ3 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
CTC1Q2NKJ3 RNU6-924P-201ENST00000362926 108 ntBASIC1.73□□□□□ -2.13
CTC1Q2NKJ3 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
CTC1Q2NKJ3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.73□□□□□ -2.13
CTC1Q2NKJ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.73□□□□□ -2.13
CTC1Q2NKJ3 Y_RNA.109-201ENST00000363215 102 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 MIR579-201ENST00000385221 98 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 SNORD12-201ENST00000391002 90 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 U7.7-201ENST00000459276 60 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 MIR3678-201ENST00000578455 94 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 MIR4452-201ENST00000583004 71 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.72□□□□□ -2.13
CTC1Q2NKJ3 SNORD89-201ENST00000390981 114 ntBASIC1.71□□□□□ -2.14
CTC1Q2NKJ3 RNA5SP102-201ENST00000516865 106 ntBASIC1.71□□□□□ -2.14
CTC1Q2NKJ3 RNU1-92P-201ENST00000517017 135 ntBASIC1.71□□□□□ -2.14
CTC1Q2NKJ3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CTC1Q2NKJ3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.7□□□□□ -2.14
CTC1Q2NKJ3 MIR4421-201ENST00000578133 69 ntBASIC1.7□□□□□ -2.14
CTC1Q2NKJ3 AL162376.1-201ENST00000624117 175 ntBASIC1.7□□□□□ -2.14
CTC1Q2NKJ3 MIR222-201ENST00000384992 110 ntBASIC1.69□□□□□ -2.14
CTC1Q2NKJ3 AC006210.1-201ENST00000424882 111 ntBASIC1.69□□□□□ -2.14
CTC1Q2NKJ3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.69□□□□□ -2.14
CTC1Q2NKJ3 AC243829.6-201ENST00000612652 106 ntBASIC1.69□□□□□ -2.14
CTC1Q2NKJ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
CTC1Q2NKJ3 RNU6-42P-201ENST00000384165 107 ntBASIC1.67□□□□□ -2.14
CTC1Q2NKJ3 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 212.9 ms