Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU6-162P-201ENST00000516228 103 ntBASIC0.08□□□□□ -2.4
PTCH1Q13635 SNORA40.13-201ENST00000516379 120 ntBASIC0.08□□□□□ -2.4
PTCH1Q13635 AC026421.1-201ENST00000519101 163 ntBASIC0.08□□□□□ -2.4
PTCH1Q13635 YWHAEP2-201ENST00000580066 112 ntBASIC0.08□□□□□ -2.4
PTCH1Q13635 SNORA42.1-201ENST00000363515 137 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 SNORD114-9-201ENST00000364370 72 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 Y_RNA.290-201ENST00000364879 114 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 Y_RNA.348-201ENST00000365403 103 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR214-201ENST00000385214 110 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR548U-201ENST00000390728 81 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR1295A-201ENST00000408463 79 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 SNORA25.13-201ENST00000516395 103 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 Y_RNA.677-201ENST00000516401 85 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 RNU5B-6P-201ENST00000516765 68 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR3064-201ENST00000581130 66 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR3925-201ENST00000584674 77 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR548O2-201ENST00000616090 70 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 uc_338.10-201ENST00000621872 182 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 MIR198-201ENST00000637333 62 ntBASIC0.07□□□□□ -2.4
PTCH1Q13635 RNU6-161P-201ENST00000363051 106 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 RNU6-32P-201ENST00000383948 107 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 RNU6-13P-201ENST00000384248 107 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 Y_RNA.495-201ENST00000384435 112 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 RNU6-12P-201ENST00000384604 107 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 RNU6-41P-201ENST00000384741 107 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 MIR451A-201ENST00000385059 72 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 Y_RNA.609-201ENST00000410669 89 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 AC104996.3-201ENST00000590718 94 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 U4.2-201ENST00000618561 85 ntBASIC0.06□□□□□ -2.4
PTCH1Q13635 RNU6-811P-201ENST00000384069 107 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 Y_RNA.491-201ENST00000384417 107 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 MIR643-201ENST00000385267 97 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
PTCH1Q13635 MIR548H2-201ENST00000408874 88 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 RNU6-1052P-201ENST00000411398 104 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 SNORA18.5-201ENST00000516616 101 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 RNU6-719P-201ENST00000516671 104 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 AC104408.1-201ENST00000605241 170 ntBASIC0.05□□□□□ -2.4
PTCH1Q13635 SNORD114-28-201ENST00000363610 72 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 RNU6-905P-201ENST00000384434 107 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 MIR516B1-201ENST00000385211 90 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 RNA5SP292-201ENST00000390974 118 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 MIR892B-201ENST00000401279 77 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 SNORA63.2-201ENST00000362603 126 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 RNU6-640P-201ENST00000363693 105 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 SCARNA11.2-201ENST00000517183 154 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 MIR4473-201ENST00000583731 91 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 AC084368.1-201ENST00000620935 65 ntBASIC0.04□□□□□ -2.4
PTCH1Q13635 RNU4-32P-201ENST00000363404 141 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 RNU6-1051P-201ENST00000365471 102 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 Y_RNA.407-201ENST00000383986 113 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MIR145-201ENST00000384967 88 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MIR876-201ENST00000401147 81 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MIR1236-201ENST00000408340 102 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 FGF7P7-201ENST00000514120 227 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 RNU6-180P-201ENST00000516697 61 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MIR548AE1-201ENST00000583292 70 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MIR3140-201ENST00000583685 90 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 MALAT1.1-201ENST00000618249 95 ntBASIC0.03□□□□□ -2.41
PTCH1Q13635 Y_RNA.81-201ENST00000362997 102 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 RNU6-153P-201ENST00000364422 104 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 Y_RNA.437-201ENST00000384113 113 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 Y_RNA.514-201ENST00000384528 112 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 SNORA75.1-201ENST00000391130 148 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 RNA5SP89-201ENST00000410300 108 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 MTATP6P29-201ENST00000415057 132 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 RNU6-168P-201ENST00000516189 101 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
PTCH1Q13635 MIR488-201ENST00000365739 83 ntBASIC0.01□□□□□ -2.41
PTCH1Q13635 SNORA24B-201ENST00000384176 131 ntBASIC0.01□□□□□ -2.41
PTCH1Q13635 MIR652-201ENST00000385278 98 ntBASIC0.01□□□□□ -2.41
PTCH1Q13635 SNORD90-201ENST00000391145 111 ntBASIC0.01□□□□□ -2.41
PTCH1Q13635 Y_RNA.660-201ENST00000516002 120 ntBASIC0.01□□□□□ -2.41
PTCH1Q13635 RNU6-633P-201ENST00000362612 103 ntBASIC0□□□□□ -2.41
PTCH1Q13635 RNU6-54P-201ENST00000365563 107 ntBASIC0□□□□□ -2.41
PTCH1Q13635 RNU6-154P-201ENST00000384306 106 ntBASIC0□□□□□ -2.41
PTCH1Q13635 SNORD116-22-201ENST00000384430 92 ntBASIC0□□□□□ -2.41
PTCH1Q13635 RNU7-165P-201ENST00000458864 60 ntBASIC0□□□□□ -2.41
PTCH1Q13635 RN7SL660P-201ENST00000614852 299 ntBASIC0□□□□□ -2.41
PTCH1Q13635 MIR20A-201ENST00000362279 71 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 RNU6-495P-201ENST00000362995 107 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 SNORD114-4-201ENST00000363962 75 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 SNORD114-29-201ENST00000364819 70 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
PTCH1Q13635 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 RNA5SP163-201ENST00000410304 99 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 snoU13.17-201ENST00000458802 104 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 SNORD42B-201ENST00000458893 67 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 RNU7-153P-201ENST00000516455 62 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 RNU7-188P-201ENST00000517063 64 ntBASIC-0.01□□□□□ -2.41
PTCH1Q13635 MIR4796-201ENST00000580742 81 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms