Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 RNU6-54P-201ENST00000365563 107 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 RNU6-1241P-201ENST00000384536 107 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 RNU6-380P-201ENST00000410207 107 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 MIR3612-201ENST00000579753 87 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 AC244669.1-204ENST00000621564 178 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 MIR4773-1-201ENST00000637203 78 ntBASIC0.72□□□□□ -2.29
DDR1Q08345 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
DDR1Q08345 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 RNY4P3-201ENST00000365254 95 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 MIR519E-201ENST00000385075 84 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 RNU6-1177P-201ENST00000391058 104 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 AC114801.3-201ENST00000510231 177 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 RNU6-1057P-201ENST00000517162 102 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 NAMPTP3-201ENST00000569273 224 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 AC011195.1-201ENST00000578177 177 ntBASIC0.71□□□□□ -2.3
DDR1Q08345 RNA5SP117-201ENST00000365294 118 ntBASIC0.7□□□□□ -2.3
DDR1Q08345 SNORD28-201ENST00000384706 75 ntBASIC0.7□□□□□ -2.3
DDR1Q08345 RNU6-587P-201ENST00000391282 106 ntBASIC0.7□□□□□ -2.3
DDR1Q08345 AC097510.1-201ENST00000510945 133 ntBASIC0.7□□□□□ -2.3
DDR1Q08345 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.7□□□□□ -2.3
DDR1Q08345 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
DDR1Q08345 MIR1297-201ENST00000637311 77 ntBASIC0.7□□□□□ -2.3
DDR1Q08345 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
DDR1Q08345 MIR18A-201ENST00000362310 71 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 SNORD115-44-201ENST00000365391 82 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 RNU4-45P-201ENST00000365469 141 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 RNY1P8-201ENST00000383970 114 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 SNORD45A-201ENST00000384512 84 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 RNU6-540P-201ENST00000384622 101 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
DDR1Q08345 Y_RNA.606-201ENST00000410579 103 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 RNU6-634P-201ENST00000459134 106 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 MIR3678-201ENST00000578455 94 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 AC067863.3-201ENST00000624172 122 ntBASIC0.69□□□□□ -2.3
DDR1Q08345 Y_RNA.433-201ENST00000384089 102 ntBASIC0.68□□□□□ -2.3
DDR1Q08345 MIR203A-201ENST00000384836 110 ntBASIC0.68□□□□□ -2.3
DDR1Q08345 MIR154-201ENST00000385243 84 ntBASIC0.68□□□□□ -2.3
DDR1Q08345 RNU6-604P-201ENST00000390917 100 ntBASIC0.68□□□□□ -2.3
DDR1Q08345 RNU2-59P-201ENST00000410482 191 ntBASIC0.68□□□□□ -2.3
DDR1Q08345 RNA5SP62-201ENST00000363457 110 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 RNU6V-201ENST00000384105 107 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 MIR617-201ENST00000385030 97 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 MIR548L-201ENST00000408303 86 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 SNORD42B-201ENST00000458893 67 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 MIR4639-201ENST00000584938 69 ntBASIC0.67□□□□□ -2.3
DDR1Q08345 RNU6-726P-201ENST00000364680 107 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 RNU6-274P-201ENST00000459566 107 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 RNU6-469P-201ENST00000516253 101 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 RNA5SP47-201ENST00000517230 109 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 AC018659.1-201ENST00000551083 169 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 MIR3675-201ENST00000583661 73 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 MIR548O2-201ENST00000616090 70 ntBASIC0.66□□□□□ -2.3
DDR1Q08345 SNORD45.1-201ENST00000363181 77 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 SNORA36.1-201ENST00000363424 132 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNU6-788P-201ENST00000390967 104 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 SNORD41.1-201ENST00000391000 69 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNU6-269P-201ENST00000391077 97 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 U3.27-201ENST00000391237 200 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 SNORD30.1-201ENST00000391309 70 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 AC093423.1-201ENST00000440817 142 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNA5SP484-201ENST00000458857 111 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNU6-539P-201ENST00000516665 103 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNU6-135P-201ENST00000516769 101 ntBASIC0.65□□□□□ -2.31
DDR1Q08345 RNU6-495P-201ENST00000362995 107 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 RNU6-990P-201ENST00000364385 104 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 SNORD115-22-201ENST00000364456 82 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 Y_RNA.386-201ENST00000383913 105 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
DDR1Q08345 SNORD75.2-201ENST00000408784 58 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 RNU6-982P-201ENST00000516216 102 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 SNORA40.17-201ENST00000517256 115 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.64□□□□□ -2.31
DDR1Q08345 RNU6-681P-201ENST00000364012 104 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 RNU6-649P-201ENST00000384463 107 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 RNU6-663P-201ENST00000391105 106 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 AL691482.2-201ENST00000457453 84 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 RNU6-871P-201ENST00000516122 100 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 RNU5B-6P-201ENST00000516765 68 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 SCARNA16.5-201ENST00000517114 183 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 AC243829.6-201ENST00000612652 106 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
DDR1Q08345 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
DDR1Q08345 VTRNA1-3-201ENST00000365645 89 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 RNU6-1039P-201ENST00000383931 107 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 RNA5SP222-201ENST00000411039 105 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 RNA5SP147-201ENST00000516493 109 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 RNU6-881P-201ENST00000516813 102 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 MIR7107-201ENST00000611489 80 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 MIR6509-201ENST00000614603 85 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 MIR5087-201ENST00000635826 76 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 U6.111-201ENST00000636093 83 ntBASIC0.62□□□□□ -2.31
DDR1Q08345 SNORD113.1-201ENST00000363280 73 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 RNU1-141P-201ENST00000364623 158 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 SNORD116-24-201ENST00000384549 92 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 MT-TY-201ENST00000387409 66 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 RNA5SP227-201ENST00000516184 113 ntBASIC0.61□□□□□ -2.31
DDR1Q08345 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms