Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MIR548AM-201ENST00000584298 74 ntBASIC-1.6□□□□□ -2.67
CD40LGP29965 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.61□□□□□ -2.67
CD40LGP29965 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.61□□□□□ -2.67
CD40LGP29965 RNU6-409P-201ENST00000384114 104 ntBASIC-1.61□□□□□ -2.67
CD40LGP29965 SNORA18.5-201ENST00000516616 101 ntBASIC-1.61□□□□□ -2.67
CD40LGP29965 RNU6-980P-201ENST00000516925 103 ntBASIC-1.61□□□□□ -2.67
CD40LGP29965 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 RNU6-841P-201ENST00000383872 107 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 MIR548U-201ENST00000390728 81 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 SNORA75.5-201ENST00000391291 81 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 RNU4-88P-201ENST00000411220 86 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 AL021921.1-201ENST00000442774 93 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 RNU6-875P-201ENST00000516488 106 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 U2.7-201ENST00000619197 100 ntBASIC-1.62□□□□□ -2.67
CD40LGP29965 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 Y_RNA.198-201ENST00000364013 98 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 SNORD18B-201ENST00000365659 72 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 MIR577-201ENST00000385196 96 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 AL691482.2-201ENST00000457453 84 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 RNU6-656P-201ENST00000516785 107 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 RNU6-988P-201ENST00000519081 107 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.63□□□□□ -2.67
CD40LGP29965 U6.81-201ENST00000612550 106 ntBASIC-1.63□□□□□ -2.67
CD40LGP29965 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 MIR601-201ENST00000385256 79 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 MIR548P-201ENST00000408336 84 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 MIR548I1-201ENST00000408810 149 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 AC120024.2-201ENST00000576526 175 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 MIR4795-201ENST00000584182 89 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 AL160413.1-201ENST00000622780 310 ntBASIC-1.64□□□□□ -2.67
CD40LGP29965 MTND1P19-201ENST00000511780 315 ntBASIC-1.65□□□□□ -2.67
CD40LGP29965 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.65□□□□□ -2.67
CD40LGP29965 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.65□□□□□ -2.67
CD40LGP29965 RNA5SP405-201ENST00000363059 114 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 RNU6-238P-201ENST00000363313 106 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 RNU6-832P-201ENST00000363319 107 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 RNU6-458P-201ENST00000384179 107 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 RNU6-880P-201ENST00000384526 107 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 SNORD127-201ENST00000458892 86 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 U6.58-201ENST00000613107 107 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 MIR3658-201ENST00000636291 56 ntBASIC-1.66□□□□□ -2.68
CD40LGP29965 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.66□□□□□ -2.68
CD40LGP29965 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 SNORD115-31-201ENST00000365318 82 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 RNU6-258P-201ENST00000390884 101 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 SNX3P1X-201ENST00000414887 175 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 RNU6-118P-201ENST00000516552 102 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 MIR3121-201ENST00000579680 77 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 AL627230.5-201ENST00000619807 58 ntBASIC-1.67□□□□□ -2.68
CD40LGP29965 RNU6-598P-201ENST00000364017 105 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 RNU6-474P-201ENST00000384243 107 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 RNU6-816P-201ENST00000390914 107 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 MIR3646-201ENST00000578301 84 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 AC103810.7-201ENST00000607821 91 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 MIR6844-201ENST00000637122 62 ntBASIC-1.68□□□□□ -2.68
CD40LGP29965 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 RNA5SP331-201ENST00000364986 107 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 RNU6-696P-201ENST00000390834 107 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 RNU6-644P-201ENST00000391155 98 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 RBMX2P4-201ENST00000441256 376 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 MIR3139-201ENST00000579145 76 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 MIR548Z-201ENST00000584743 97 ntBASIC-1.69□□□□□ -2.68
CD40LGP29965 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 RNY4P28-201ENST00000365281 93 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 RNU2-38P-201ENST00000410856 79 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 MTATP6P29-201ENST00000415057 132 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 MIR4680-201ENST00000580906 66 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 MIR548W-201ENST00000581970 74 ntBASIC-1.7□□□□□ -2.68
CD40LGP29965 RNU6-766P-201ENST00000362478 107 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 MIR1263-201ENST00000408324 86 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 AC013734.1-201ENST00000619329 111 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 MIR198-201ENST00000637333 62 ntBASIC-1.71□□□□□ -2.68
CD40LGP29965 RNU6-807P-201ENST00000516805 107 ntBASIC-1.72□□□□□ -2.68
CD40LGP29965 U2.18-201ENST00000622185 84 ntBASIC-1.72□□□□□ -2.68
CD40LGP29965 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.73□□□□□ -2.69
CD40LGP29965 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.73□□□□□ -2.69
CD40LGP29965 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.73□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 239.5 ms