Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-153P-201ENST00000364422 104 ntBASIC-4.87□□□□□ -3.19
VCANP13611 MIR1255B1-201ENST00000636325 63 ntBASIC-4.87□□□□□ -3.19
VCANP13611 RNU6-1090P-201ENST00000364065 94 ntBASIC-4.87□□□□□ -3.19
VCANP13611 RNU6-224P-201ENST00000384055 107 ntBASIC-4.87□□□□□ -3.19
VCANP13611 RNU6-937P-201ENST00000384325 106 ntBASIC-4.88□□□□□ -3.19
VCANP13611 RNU6-769P-201ENST00000384407 104 ntBASIC-4.88□□□□□ -3.19
VCANP13611 AC073114.1-201ENST00000612027 490 ntBASIC-4.88□□□□□ -3.19
VCANP13611 Y_RNA.424-201ENST00000384063 103 ntBASIC-4.88□□□□□ -3.19
VCANP13611 RNU6-790P-201ENST00000384479 105 ntBASIC-4.88□□□□□ -3.19
VCANP13611 AC018645.2-201ENST00000609151 472 ntBASIC-4.88□□□□□ -3.19
VCANP13611 U2.1-201ENST00000618978 145 ntBASIC-4.88□□□□□ -3.19
VCANP13611 RNU6-363P-201ENST00000362895 105 ntBASIC-4.89□□□□□ -3.19
VCANP13611 RNU7-87P-201ENST00000459343 62 ntBASIC-4.89□□□□□ -3.19
VCANP13611 MIR3145-201ENST00000580727 82 ntBASIC-4.89□□□□□ -3.19
VCANP13611 Y_RNA.602-201ENST00000410535 92 ntBASIC-4.89□□□□□ -3.19
VCANP13611 RNU6-201P-201ENST00000517100 61 ntBASIC-4.89□□□□□ -3.19
VCANP13611 AL050303.3-201ENST00000613704 284 ntBASIC-4.89□□□□□ -3.19
VCANP13611 RNU6-644P-201ENST00000391155 98 ntBASIC-4.9□□□□□ -3.19
VCANP13611 RNU6-1148P-201ENST00000410992 104 ntBASIC-4.9□□□□□ -3.19
VCANP13611 MIR1236-201ENST00000408340 102 ntBASIC-4.9□□□□□ -3.19
VCANP13611 RNU6-1225P-201ENST00000516336 65 ntBASIC-4.91□□□□□ -3.2
VCANP13611 AP002963.1-201ENST00000530590 184 ntBASIC-4.91□□□□□ -3.2
VCANP13611 AC007485.1-201ENST00000616755 206 ntBASIC-4.91□□□□□ -3.2
VCANP13611 AC021753.1-201ENST00000635724 168 ntBASIC-4.91□□□□□ -3.2
VCANP13611 SNORA69.1-201ENST00000390904 137 ntBASIC-4.91□□□□□ -3.2
VCANP13611 Y_RNA.722-201ENST00000517279 114 ntBASIC-4.91□□□□□ -3.2
VCANP13611 MIR548AL-201ENST00000578416 97 ntBASIC-4.91□□□□□ -3.2
VCANP13611 Y_RNA.408-201ENST00000383987 102 ntBASIC-4.92□□□□□ -3.2
VCANP13611 Y_RNA.526-201ENST00000384572 110 ntBASIC-4.92□□□□□ -3.2
VCANP13611 RNU6-88P-201ENST00000606801 100 ntBASIC-4.92□□□□□ -3.2
VCANP13611 RNU6-330P-201ENST00000363015 107 ntBASIC-4.93□□□□□ -3.2
VCANP13611 RNU6-1009P-201ENST00000390996 107 ntBASIC-4.93□□□□□ -3.2
VCANP13611 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-4.94□□□□□ -3.2
VCANP13611 AC013791.1-201ENST00000616619 62 ntBASIC-4.94□□□□□ -3.2
VCANP13611 Z69908.1-201ENST00000622603 247 ntBASIC-4.95□□□□□ -3.2
VCANP13611 RNU6-240P-201ENST00000516098 97 ntBASIC-4.95□□□□□ -3.2
VCANP13611 MIR4777-201ENST00000583710 86 ntBASIC-4.95□□□□□ -3.2
VCANP13611 AC006006.1-201ENST00000603082 144 ntBASIC-4.95□□□□□ -3.2
VCANP13611 MIR526A2-201ENST00000390198 65 ntBASIC-4.95□□□□□ -3.2
VCANP13611 MIR548X-201ENST00000580069 75 ntBASIC-4.95□□□□□ -3.2
VCANP13611 MT-TT-201ENST00000387460 66 ntBASIC-4.96□□□□□ -3.2
VCANP13611 SCARNA15.1-201ENST00000516384 125 ntBASIC-4.96□□□□□ -3.2
VCANP13611 RNU6-1204P-201ENST00000363948 107 ntBASIC-4.97□□□□□ -3.2
VCANP13611 SNORA8.1-201ENST00000384250 140 ntBASIC-4.97□□□□□ -3.21
VCANP13611 RNU6-303P-201ENST00000517091 106 ntBASIC-4.97□□□□□ -3.21
VCANP13611 MIR4796-201ENST00000580742 81 ntBASIC-4.97□□□□□ -3.21
VCANP13611 RNU6-808P-201ENST00000391233 108 ntBASIC-4.98□□□□□ -3.21
VCANP13611 RNA5SP236-201ENST00000516169 116 ntBASIC-4.98□□□□□ -3.21
VCANP13611 MIR4775-201ENST00000581168 75 ntBASIC-4.98□□□□□ -3.21
VCANP13611 RNU6-462P-201ENST00000362659 105 ntBASIC-4.98□□□□□ -3.21
VCANP13611 RNU6-595P-201ENST00000363944 107 ntBASIC-4.98□□□□□ -3.21
VCANP13611 SNORD116-2-201ENST00000384274 95 ntBASIC-4.98□□□□□ -3.21
VCANP13611 Y_RNA.682-201ENST00000516457 100 ntBASIC-4.99□□□□□ -3.21
VCANP13611 MTND4LP25-201ENST00000570218 163 ntBASIC-4.99□□□□□ -3.21
VCANP13611 DEFB117-201ENST00000602356 141 ntBASIC-4.99□□□□□ -3.21
VCANP13611 AP001318.4-201ENST00000616637 121 ntBASIC-4.99□□□□□ -3.21
VCANP13611 Y_RNA.77-201ENST00000362962 107 ntBASIC-4.99□□□□□ -3.21
VCANP13611 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-4.99□□□□□ -3.21
VCANP13611 Z84480.1-201ENST00000605131 311 ntBASIC-4.99□□□□□ -3.21
VCANP13611 MIR3163-201ENST00000581592 73 ntBASIC-5□□□□□ -3.21
VCANP13611 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-5.01□□□□□ -3.21
VCANP13611 RNU6-1248P-201ENST00000391096 64 ntBASIC-5.01□□□□□ -3.21
VCANP13611 RNU6-1003P-201ENST00000517099 105 ntBASIC-5.01□□□□□ -3.21
VCANP13611 Y_RNA.230-201ENST00000364348 109 ntBASIC-5.01□□□□□ -3.21
VCANP13611 Y_RNA.367-201ENST00000365544 101 ntBASIC-5.01□□□□□ -3.21
VCANP13611 RNU6-402P-201ENST00000410678 103 ntBASIC-5.01□□□□□ -3.21
VCANP13611 MIR4439-201ENST00000583746 80 ntBASIC-5.01□□□□□ -3.21
VCANP13611 RN7SKP295-201ENST00000517264 153 ntBASIC-5.01□□□□□ -3.21
VCANP13611 SNORD58.1-201ENST00000391313 66 ntBASIC-5.02□□□□□ -3.21
VCANP13611 RNU7-187P-201ENST00000458985 68 ntBASIC-5.02□□□□□ -3.21
VCANP13611 Y_RNA.655-201ENST00000515919 96 ntBASIC-5.02□□□□□ -3.21
VCANP13611 MIR5688-201ENST00000580619 83 ntBASIC-5.02□□□□□ -3.21
VCANP13611 RNU6-903P-201ENST00000391270 109 ntBASIC-5.02□□□□□ -3.21
VCANP13611 RNU6-891P-201ENST00000384280 111 ntBASIC-5.03□□□□□ -3.21
VCANP13611 MT-TH-201ENST00000387441 69 ntBASIC-5.03□□□□□ -3.21
VCANP13611 RNU6-273P-201ENST00000516937 96 ntBASIC-5.03□□□□□ -3.21
VCANP13611 Y_RNA.155-201ENST00000363632 101 ntBASIC-5.04□□□□□ -3.22
VCANP13611 MT-TI-201ENST00000387365 69 ntBASIC-5.04□□□□□ -3.22
VCANP13611 RNU6-940P-201ENST00000363433 104 ntBASIC-5.05□□□□□ -3.22
VCANP13611 RNU6-1109P-201ENST00000391187 107 ntBASIC-5.05□□□□□ -3.22
VCANP13611 SCARNA23-201ENST00000516060 130 ntBASIC-5.05□□□□□ -3.22
VCANP13611 RNU7-153P-201ENST00000516455 62 ntBASIC-5.05□□□□□ -3.22
VCANP13611 Y_RNA.275-201ENST00000364726 110 ntBASIC-5.05□□□□□ -3.22
VCANP13611 MIR4703-201ENST00000577728 79 ntBASIC-5.05□□□□□ -3.22
VCANP13611 Y_RNA.176-201ENST00000363815 109 ntBASIC-5.06□□□□□ -3.22
VCANP13611 MRPL42P2-201ENST00000403169 426 ntBASIC-5.06□□□□□ -3.22
VCANP13611 SNORA75-201ENST00000384158 137 ntBASIC-5.07□□□□□ -3.22
VCANP13611 RNU6-1015P-201ENST00000517121 99 ntBASIC-5.07□□□□□ -3.22
VCANP13611 MIR5708-201ENST00000579723 85 ntBASIC-5.07□□□□□ -3.22
VCANP13611 SNORD81.1-201ENST00000363064 77 ntBASIC-5.07□□□□□ -3.22
VCANP13611 RNU6-876P-201ENST00000391295 104 ntBASIC-5.07□□□□□ -3.22
VCANP13611 SNORD45A-201ENST00000384512 84 ntBASIC-5.07□□□□□ -3.22
VCANP13611 DLEU2_5.1-201ENST00000615567 84 ntBASIC-5.07□□□□□ -3.22
VCANP13611 AC019235.1-201ENST00000503847 207 ntBASIC-5.08□□□□□ -3.22
VCANP13611 RNY4P20-201ENST00000516678 93 ntBASIC-5.08□□□□□ -3.22
VCANP13611 RNU6-453P-201ENST00000516819 85 ntBASIC-5.08□□□□□ -3.22
VCANP13611 MIR4273-201ENST00000582824 84 ntBASIC-5.08□□□□□ -3.22
VCANP13611 MIR4307-201ENST00000582802 84 ntBASIC-5.08□□□□□ -3.22
VCANP13611 Y_RNA.435-201ENST00000384095 112 ntBASIC-5.08□□□□□ -3.22
VCANP13611 RNU6-648P-201ENST00000410190 107 ntBASIC-5.08□□□□□ -3.22
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms