Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RNU6-346P-201ENST00000516288 111 ntBASIC-0.89□□□□□ -2.55
HLA-DPB1P04440 RNU6-881P-201ENST00000516813 102 ntBASIC-0.89□□□□□ -2.55
HLA-DPB1P04440 MIR4777-201ENST00000583710 86 ntBASIC-0.89□□□□□ -2.55
HLA-DPB1P04440 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 MIRLET7B-201ENST00000385140 83 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 MT-TQ-201ENST00000387372 72 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 RNA5SP292-201ENST00000390974 118 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 MIR1265-201ENST00000408444 86 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 Z95118.1-201ENST00000421372 247 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 RNU6-795P-201ENST00000516323 103 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 MIR3914-2-201ENST00000637339 95 ntBASIC-0.9□□□□□ -2.55
HLA-DPB1P04440 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.91□□□□□ -2.56
HLA-DPB1P04440 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.91□□□□□ -2.56
HLA-DPB1P04440 RNU6-905P-201ENST00000384434 107 ntBASIC-0.91□□□□□ -2.56
HLA-DPB1P04440 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.91□□□□□ -2.56
HLA-DPB1P04440 SNORD115-23-201ENST00000364461 82 ntBASIC-0.92□□□□□ -2.56
HLA-DPB1P04440 AC012531.4-201ENST00000616509 177 ntBASIC-0.92□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 RNU6-519P-201ENST00000410590 108 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 AC021146.9-201ENST00000512503 156 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 RNU6-255P-201ENST00000516957 105 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 snoR1.1-201ENST00000628177 80 ntBASIC-0.93□□□□□ -2.56
HLA-DPB1P04440 RNA5SP368-201ENST00000364298 116 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 MIR517B-201ENST00000385102 67 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 MIR196A1-201ENST00000388006 70 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 SNORD75.2-201ENST00000408784 58 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 AP000533.3-201ENST00000447704 118 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 AC022137.1-201ENST00000483735 151 ntBASIC-0.94□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 RNU4-36P-201ENST00000364294 144 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 RNU7-24P-201ENST00000458867 62 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 SNORA18.5-201ENST00000516616 101 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.95□□□□□ -2.56
HLA-DPB1P04440 MIR548A3-201ENST00000385297 97 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 RNA5SP25-201ENST00000410815 110 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 RNU6-62P-201ENST00000516526 102 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 RNA5SP395-201ENST00000516567 118 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 AC090617.8-201ENST00000623339 167 ntBASIC-0.96□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 RNU6-80P-201ENST00000384195 107 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 SNORA19.1-201ENST00000410656 129 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 RNU6-659P-201ENST00000516454 104 ntBASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.97□□□□□ -2.56
HLA-DPB1P04440 SNORD74.6-201ENST00000364796 70 ntBASIC-0.98□□□□□ -2.57
HLA-DPB1P04440 RNU6-382P-201ENST00000365181 106 ntBASIC-0.98□□□□□ -2.57
HLA-DPB1P04440 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.98□□□□□ -2.57
HLA-DPB1P04440 U6.95-201ENST00000636931 70 ntBASIC-0.98□□□□□ -2.57
HLA-DPB1P04440 SNORD114-25-201ENST00000363742 72 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 RNY4P3-201ENST00000365254 95 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 RNY1P5-201ENST00000383890 115 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 SCARNA17-201ENST00000516183 144 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 U6.96-201ENST00000636425 70 ntBASIC-0.99□□□□□ -2.57
HLA-DPB1P04440 RNU4-32P-201ENST00000363404 141 ntBASIC-1□□□□□ -2.57
HLA-DPB1P04440 Y_RNA.246-201ENST00000364495 108 ntBASIC-1□□□□□ -2.57
HLA-DPB1P04440 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1□□□□□ -2.57
HLA-DPB1P04440 MIR548I1-201ENST00000408810 149 ntBASIC-1□□□□□ -2.57
HLA-DPB1P04440 snoU13.17-201ENST00000458802 104 ntBASIC-1□□□□□ -2.57
HLA-DPB1P04440 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1□□□□□ -2.57
HLA-DPB1P04440 AC090425.1-201ENST00000610007 140 ntBASIC-1□□□□□ -2.57
HLA-DPB1P04440 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 RNU6-824P-201ENST00000363724 104 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 SNORD58A-201ENST00000383875 65 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 SNORD83B-201ENST00000386745 93 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 MTATP6P29-201ENST00000415057 132 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 YWHAEP3-201ENST00000582767 121 ntBASIC-1.01□□□□□ -2.57
HLA-DPB1P04440 MIR124-2-201ENST00000385081 109 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 RNU6-907P-201ENST00000390924 102 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 RNA5SP147-201ENST00000516493 109 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 AC006254.2-201ENST00000603259 279 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 MIR4773-1-201ENST00000637203 78 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 MIR6086-201ENST00000638065 55 ntBASIC-1.02□□□□□ -2.57
HLA-DPB1P04440 RNU6-208P-201ENST00000362431 107 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 RNU6-260P-201ENST00000384092 107 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 MIR203A-201ENST00000384836 110 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 SNORD18.2-201ENST00000459604 70 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 SCARNA23-201ENST00000516060 130 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 RNU6-904P-201ENST00000516206 101 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 AC026421.1-201ENST00000519101 163 ntBASIC-1.03□□□□□ -2.57
HLA-DPB1P04440 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.04□□□□□ -2.58
HLA-DPB1P04440 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.04□□□□□ -2.58
HLA-DPB1P04440 RNU6-887P-201ENST00000410660 100 ntBASIC-1.04□□□□□ -2.58
HLA-DPB1P04440 MIR4464-201ENST00000580818 92 ntBASIC-1.04□□□□□ -2.58
HLA-DPB1P04440 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.04□□□□□ -2.58
HLA-DPB1P04440 RNU6-880P-201ENST00000384526 107 ntBASIC-1.05□□□□□ -2.58
HLA-DPB1P04440 RNU6-972P-201ENST00000391208 107 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 388 ms