Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
PGK1P00558 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.46□□□□□ -2.48
PGK1P00558 RNU6-719P-201ENST00000516671 104 ntBASIC-0.46□□□□□ -2.48
PGK1P00558 RNA5SP169-201ENST00000517268 117 ntBASIC-0.46□□□□□ -2.48
PGK1P00558 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
PGK1P00558 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
PGK1P00558 RNU6-959P-201ENST00000384671 107 ntBASIC-0.47□□□□□ -2.48
PGK1P00558 RNU6-537P-201ENST00000517277 103 ntBASIC-0.47□□□□□ -2.48
PGK1P00558 AP000676.1-201ENST00000533307 52 ntBASIC-0.47□□□□□ -2.48
PGK1P00558 MIR3140-201ENST00000583685 90 ntBASIC-0.47□□□□□ -2.48
PGK1P00558 SNORA63.2-201ENST00000362603 126 ntBASIC-0.48□□□□□ -2.49
PGK1P00558 SNORD56B-201ENST00000384713 71 ntBASIC-0.48□□□□□ -2.49
PGK1P00558 RNA5SP292-201ENST00000390974 118 ntBASIC-0.48□□□□□ -2.49
PGK1P00558 SNORD126-201ENST00000459475 77 ntBASIC-0.48□□□□□ -2.49
PGK1P00558 SNORD115-25-201ENST00000362619 82 ntBASIC-0.49□□□□□ -2.49
PGK1P00558 SNORD14C-201ENST00000365382 88 ntBASIC-0.49□□□□□ -2.49
PGK1P00558 MIR548U-201ENST00000390728 81 ntBASIC-0.49□□□□□ -2.49
PGK1P00558 SNORD90-201ENST00000391145 111 ntBASIC-0.49□□□□□ -2.49
PGK1P00558 RNU6-412P-201ENST00000516434 106 ntBASIC-0.49□□□□□ -2.49
PGK1P00558 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 SNORA32.3-201ENST00000384772 121 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 RNU6-519P-201ENST00000410590 108 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 AL445193.1-201ENST00000441183 141 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 SCARNA23-201ENST00000516060 130 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 MIR4432-201ENST00000581823 84 ntBASIC-0.5□□□□□ -2.49
PGK1P00558 RNU6-81P-201ENST00000365608 104 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 snoU13.13-201ENST00000458842 104 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 AC114755.3-201ENST00000481111 251 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 AL365222.1-201ENST00000614661 98 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
PGK1P00558 RNU6-900P-201ENST00000384498 102 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 RNU6-476P-201ENST00000384726 107 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 RNU6-887P-201ENST00000410660 100 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 RNU4-63P-201ENST00000411313 118 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 AC008267.6-201ENST00000441664 139 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 RNU7-55P-201ENST00000459426 62 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 RNA5SP66-201ENST00000517178 101 ntBASIC-0.52□□□□□ -2.49
PGK1P00558 MIR409-201ENST00000362237 79 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 RNU6-495P-201ENST00000362995 107 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 SNORD114-4-201ENST00000363962 75 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 SNORD58A-201ENST00000383875 65 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 MIR590-201ENST00000385008 97 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 RNU6-554P-201ENST00000410466 106 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 RNU6-284P-201ENST00000411105 106 ntBASIC-0.53□□□□□ -2.49
PGK1P00558 RNU6-62P-201ENST00000516526 102 ntBASIC-0.54□□□□□ -2.5
PGK1P00558 MIR4280-201ENST00000582178 76 ntBASIC-0.54□□□□□ -2.5
PGK1P00558 MIR4436A-201ENST00000585278 85 ntBASIC-0.54□□□□□ -2.5
PGK1P00558 RNA5SP331-201ENST00000364986 107 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 RNU6-106P-201ENST00000384405 107 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 SNORA19-201ENST00000384737 128 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 RNU6-972P-201ENST00000391208 107 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 SNORD75.1-201ENST00000408373 60 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 MIR548AX-201ENST00000580117 73 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 MIR6129-201ENST00000616087 109 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 uc_338.36-201ENST00000622331 158 ntBASIC-0.55□□□□□ -2.5
PGK1P00558 RNU6-502P-201ENST00000362419 108 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 SNORD75.2-201ENST00000408784 58 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 SNORD57-201ENST00000448188 72 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.56□□□□□ -2.5
PGK1P00558 SNORD2-201ENST00000459163 69 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 RNU7-61P-201ENST00000515897 61 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 SNORD38.3-201ENST00000516599 73 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 SNORA18.5-201ENST00000516616 101 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 SNORA40.17-201ENST00000517256 115 ntBASIC-0.56□□□□□ -2.5
PGK1P00558 RNU6-990P-201ENST00000364385 104 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 RNU7-24P-201ENST00000458867 62 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 AC026421.1-201ENST00000519101 163 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 MIR5704-201ENST00000584029 77 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 AC093726.3-201ENST00000637588 150 ntBASIC-0.57□□□□□ -2.5
PGK1P00558 RNU4-32P-201ENST00000363404 141 ntBASIC-0.58□□□□□ -2.5
PGK1P00558 SNORD116-10-201ENST00000363791 102 ntBASIC-0.58□□□□□ -2.5
PGK1P00558 SNORA63.6-201ENST00000364921 119 ntBASIC-0.58□□□□□ -2.5
PGK1P00558 RNA5SP266-201ENST00000410273 108 ntBASIC-0.58□□□□□ -2.5
PGK1P00558 RNU6-589P-201ENST00000516485 107 ntBASIC-0.58□□□□□ -2.5
PGK1P00558 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.59□□□□□ -2.5
PGK1P00558 MT-TQ-201ENST00000387372 72 ntBASIC-0.59□□□□□ -2.5
PGK1P00558 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
PGK1P00558 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.59□□□□□ -2.5
PGK1P00558 RNU6-109P-201ENST00000516364 107 ntBASIC-0.59□□□□□ -2.5
PGK1P00558 RNU6-184P-201ENST00000516514 107 ntBASIC-0.59□□□□□ -2.5
PGK1P00558 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 RNU6-973P-201ENST00000364690 107 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 MIR1302-5-201ENST00000408164 150 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 MIR6773-201ENST00000612812 74 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 MIR6851-201ENST00000617060 67 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 MIR8068-201ENST00000618032 68 ntBASIC-0.6□□□□□ -2.51
PGK1P00558 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 RNU6-901P-201ENST00000384593 106 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 SNORA3B-201ENST00000391305 131 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 MIR548M-201ENST00000408260 86 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.61□□□□□ -2.51
PGK1P00558 RNU6-824P-201ENST00000363724 104 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms