Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SNORD42B-201ENST00000458893 67 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 SNORA25.13-201ENST00000516395 103 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 RNU5B-6P-201ENST00000516765 68 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 MIR4460-201ENST00000577862 86 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 YWHAEP2-201ENST00000580066 112 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 MIR4796-201ENST00000580742 81 ntBASIC0.18□□□□□ -2.38
CTNND1O60716 SNORA42.1-201ENST00000363515 137 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-652P-201ENST00000365488 107 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-54P-201ENST00000365563 107 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 MIR519C-201ENST00000385053 87 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-1052P-201ENST00000411398 104 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-719P-201ENST00000516671 104 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-782P-201ENST00000516852 104 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 RNU6-1057P-201ENST00000517162 102 ntBASIC0.17□□□□□ -2.38
CTNND1O60716 Y_RNA.437-201ENST00000384113 113 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 MIR216B-201ENST00000390186 82 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 MIR876-201ENST00000401147 81 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 FGF7P7-201ENST00000514120 227 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 MIR548BB-201ENST00000626714 66 ntBASIC0.16□□□□□ -2.38
CTNND1O60716 RNU6-495P-201ENST00000362995 107 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 RNU6-624P-201ENST00000363411 107 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 MIR643-201ENST00000385267 97 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
CTNND1O60716 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 RNA5SP170-201ENST00000517150 101 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 AC140658.3-201ENST00000567603 271 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 MIR4473-201ENST00000583731 91 ntBASIC0.15□□□□□ -2.39
CTNND1O60716 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
CTNND1O60716 RNA5SP214-201ENST00000363378 118 ntBASIC0.14□□□□□ -2.39
CTNND1O60716 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
CTNND1O60716 MIR5190-201ENST00000581537 80 ntBASIC0.14□□□□□ -2.39
CTNND1O60716 AC006160.2-201ENST00000637708 154 ntBASIC0.14□□□□□ -2.39
CTNND1O60716 Y_RNA.73-201ENST00000362910 113 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 RNU6-824P-201ENST00000363724 104 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 RNU6-294P-201ENST00000364999 102 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 RNU6-1177P-201ENST00000391058 104 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 MTATP6P29-201ENST00000415057 132 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 RNU6-175P-201ENST00000516896 107 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 SNORA40.17-201ENST00000517256 115 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 snoMBII-202.2-201ENST00000517263 86 ntBASIC0.13□□□□□ -2.39
CTNND1O60716 SNORD114-9-201ENST00000364370 72 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 RNU6-979P-201ENST00000383896 107 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 Y_RNA.407-201ENST00000383986 113 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 Y_RNA.433-201ENST00000384089 102 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 MIR610-201ENST00000385139 96 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 MIR652-201ENST00000385278 98 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 RNU7-24P-201ENST00000458867 62 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 AC093729.1-201ENST00000513074 128 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 AC104408.1-201ENST00000605241 170 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 RN7SL660P-201ENST00000614852 299 ntBASIC0.12□□□□□ -2.39
CTNND1O60716 RNU6-1134P-201ENST00000365156 101 ntBASIC0.11□□□□□ -2.39
CTNND1O60716 RNU6-762P-201ENST00000517107 102 ntBASIC0.11□□□□□ -2.39
CTNND1O60716 Y_RNA.43-201ENST00000362670 111 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 SNORD114-5-201ENST00000362928 70 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 MIR516B1-201ENST00000385211 90 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 MIR892B-201ENST00000401279 77 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 SNORD75.2-201ENST00000408784 58 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 RNU7-188P-201ENST00000517063 64 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 MIR5588-201ENST00000581890 63 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 U6.81-201ENST00000612550 106 ntBASIC0.1□□□□□ -2.39
CTNND1O60716 RNU6-1255P-201ENST00000363434 112 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 RNU6-382P-201ENST00000365181 106 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 MIR582-201ENST00000365731 98 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 RNU6-154P-201ENST00000384306 106 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 Y_RNA.606-201ENST00000410579 103 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 AC097510.1-201ENST00000510945 133 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 SCARNA17.3-201ENST00000516381 125 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 RNU6-180P-201ENST00000516697 61 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 SCARNA11.2-201ENST00000517183 154 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 MIR4743-201ENST00000584576 69 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 uc_338.10-201ENST00000621872 182 ntBASIC0.09□□□□□ -2.4
CTNND1O60716 RNU6-478P-201ENST00000363904 110 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 RNY4P3-201ENST00000365254 95 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 SNORA49-201ENST00000386157 136 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 MIR548E-201ENST00000408287 88 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 Y_RNA.611-201ENST00000410682 108 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 RNU6-557P-201ENST00000516842 110 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 AC062037.1-201ENST00000605302 128 ntBASIC0.08□□□□□ -2.4
CTNND1O60716 RNU5F-1-201ENST00000362507 117 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 MIR145-201ENST00000384967 88 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.07□□□□□ -2.4
CTNND1O60716 AL450471.1-201ENST00000447509 127 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 RNU7-171P-201ENST00000459581 62 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 Y_RNA.660-201ENST00000516002 120 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 MIR4290-201ENST00000583807 95 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 AC145423.2-201ENST00000610631 239 ntBASIC0.07□□□□□ -2.4
CTNND1O60716 RNU6-787P-201ENST00000384032 107 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 Y_RNA.532-201ENST00000384590 113 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 MIR593-201ENST00000384856 100 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 MIR106A-201ENST00000384870 81 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 MIR450A2-201ENST00000385022 100 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 SNORA75.1-201ENST00000391130 148 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 RNU6-592P-201ENST00000411333 103 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 AC084368.1-201ENST00000620935 65 ntBASIC0.06□□□□□ -2.4
CTNND1O60716 RNU6-208P-201ENST00000362431 107 ntBASIC0.05□□□□□ -2.4
CTNND1O60716 Y_RNA.178-201ENST00000363832 102 ntBASIC0.05□□□□□ -2.4
CTNND1O60716 RNY1P1-201ENST00000364372 112 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms