Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MIR4432-201ENST00000581823 84 ntBASIC-0.39□□□□□ -2.47
MSH4O15457 MIR4280-201ENST00000582178 76 ntBASIC-0.39□□□□□ -2.47
MSH4O15457 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.39□□□□□ -2.47
MSH4O15457 RNU6-746P-201ENST00000384112 109 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-519P-201ENST00000410590 108 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-284P-201ENST00000411105 106 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 AC114755.3-201ENST00000481111 251 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-904P-201ENST00000516206 101 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-412P-201ENST00000516434 106 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
MSH4O15457 RNU6-502P-201ENST00000362419 108 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNA5SP368-201ENST00000364298 116 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 SNORD58A-201ENST00000383875 65 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNU6-959P-201ENST00000384671 107 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNA5SP292-201ENST00000390974 118 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNA5SP451-201ENST00000410588 110 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 snoU13.13-201ENST00000458842 104 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 SCARNA23-201ENST00000516060 130 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNU6-62P-201ENST00000516526 102 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 SNORA40.17-201ENST00000517256 115 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 AC093726.3-201ENST00000637588 150 ntBASIC-0.41□□□□□ -2.48
MSH4O15457 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNU6-901P-201ENST00000384593 106 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNU6-476P-201ENST00000384726 107 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 SNORD90-201ENST00000391145 111 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNU6-972P-201ENST00000391208 107 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNA5SP169-201ENST00000517268 117 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 RNU6-537P-201ENST00000517277 103 ntBASIC-0.42□□□□□ -2.48
MSH4O15457 MIR604-201ENST00000384880 94 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 RNU6-887P-201ENST00000410660 100 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 RNU7-24P-201ENST00000458867 62 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 SNORA18.5-201ENST00000516616 101 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 MIR6851-201ENST00000617060 67 ntBASIC-0.43□□□□□ -2.48
MSH4O15457 RNU4-32P-201ENST00000363404 141 ntBASIC-0.44□□□□□ -2.48
MSH4O15457 RNU6-973P-201ENST00000364690 107 ntBASIC-0.44□□□□□ -2.48
MSH4O15457 RNU6-81P-201ENST00000365608 104 ntBASIC-0.44□□□□□ -2.48
MSH4O15457 SNORD75.2-201ENST00000408784 58 ntBASIC-0.44□□□□□ -2.48
MSH4O15457 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.44□□□□□ -2.48
MSH4O15457 SNORD114-14-201ENST00000362723 75 ntBASIC-0.45□□□□□ -2.48
MSH4O15457 RNU6-337P-201ENST00000391243 106 ntBASIC-0.45□□□□□ -2.48
MSH4O15457 SNORD38.3-201ENST00000516599 73 ntBASIC-0.45□□□□□ -2.48
MSH4O15457 AL365222.1-201ENST00000614661 98 ntBASIC-0.45□□□□□ -2.48
MSH4O15457 AL391099.1-201ENST00000624635 187 ntBASIC-0.45□□□□□ -2.48
MSH4O15457 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 RNU6-990P-201ENST00000364385 104 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 SNORA63.6-201ENST00000364921 119 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 RNY4P3-201ENST00000365254 95 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 MIR590-201ENST00000385008 97 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 MTATP6P29-201ENST00000415057 132 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 AC008267.6-201ENST00000441664 139 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 AC026421.1-201ENST00000519101 163 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 MIR6773-201ENST00000612812 74 ntBASIC-0.46□□□□□ -2.48
MSH4O15457 SNORD116-10-201ENST00000363791 102 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU6-106P-201ENST00000384405 107 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 MIR1302-5-201ENST00000408164 150 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU7-61P-201ENST00000515897 61 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU6-162P-201ENST00000516228 103 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU6-109P-201ENST00000516364 107 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU6-184P-201ENST00000516514 107 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNA5SP476-201ENST00000516613 103 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 MIR4436A-201ENST00000585278 85 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 AC108676.2-201ENST00000605225 163 ntBASIC-0.47□□□□□ -2.48
MSH4O15457 RNU6-382P-201ENST00000365181 106 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 SNORA19-201ENST00000384737 128 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 MIR224-201ENST00000384889 81 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 MIRLET7B-201ENST00000385140 83 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 MIR204-201ENST00000385200 110 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
MSH4O15457 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 RNU6-554P-201ENST00000410466 106 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 RPS29P8-201ENST00000445109 171 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 snoU13.17-201ENST00000458802 104 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.48□□□□□ -2.49
MSH4O15457 MIR5704-201ENST00000584029 77 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 MIR6129-201ENST00000616087 109 ntBASIC-0.48□□□□□ -2.49
MSH4O15457 RNU6-824P-201ENST00000363724 104 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 SNORD115-23-201ENST00000364461 82 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 RNA5SP25-201ENST00000410815 110 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 RNU6-592P-201ENST00000411333 103 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 SNORA13-201ENST00000458790 133 ntBASIC-0.49□□□□□ -2.49
MSH4O15457 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.5□□□□□ -2.49
MSH4O15457 snoU13.19-201ENST00000459148 104 ntBASIC-0.5□□□□□ -2.49
MSH4O15457 AC006254.2-201ENST00000603259 279 ntBASIC-0.5□□□□□ -2.49
MSH4O15457 MIR6854-201ENST00000614935 69 ntBASIC-0.5□□□□□ -2.49
MSH4O15457 MIR8068-201ENST00000618032 68 ntBASIC-0.5□□□□□ -2.49
MSH4O15457 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms