Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 MIR3064-201ENST00000581130 66 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 MIR4280-201ENST00000582178 76 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 MIR548Z-201ENST00000584743 97 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 AC104996.3-201ENST00000590718 94 ntBASIC-0.68□□□□□ -2.52
NPIPA2E9PIF3 AC097510.1-201ENST00000510945 133 ntBASIC-0.69□□□□□ -2.52
NPIPA2E9PIF3 RNU6-795P-201ENST00000516323 103 ntBASIC-0.69□□□□□ -2.52
NPIPA2E9PIF3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 RNU4-36P-201ENST00000364294 144 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 RNU6-659P-201ENST00000516454 104 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 MIR3140-201ENST00000583685 90 ntBASIC-0.7□□□□□ -2.52
NPIPA2E9PIF3 SNORA63.6-201ENST00000364921 119 ntBASIC-0.71□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.71□□□□□ -2.52
NPIPA2E9PIF3 SNORD4B-201ENST00000459083 72 ntBASIC-0.71□□□□□ -2.52
NPIPA2E9PIF3 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 RNU6-476P-201ENST00000384726 107 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 RNU6-519P-201ENST00000410590 108 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 MIR4777-201ENST00000583710 86 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 AC012531.4-201ENST00000616509 177 ntBASIC-0.72□□□□□ -2.52
NPIPA2E9PIF3 RNU6-495P-201ENST00000362995 107 ntBASIC-0.73□□□□□ -2.53
NPIPA2E9PIF3 SNORA24B-201ENST00000384176 131 ntBASIC-0.73□□□□□ -2.53
NPIPA2E9PIF3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.73□□□□□ -2.53
NPIPA2E9PIF3 RNU6-62P-201ENST00000516526 102 ntBASIC-0.73□□□□□ -2.53
NPIPA2E9PIF3 MIR4436A-201ENST00000585278 85 ntBASIC-0.73□□□□□ -2.53
NPIPA2E9PIF3 RNU6-880P-201ENST00000384526 107 ntBASIC-0.74□□□□□ -2.53
NPIPA2E9PIF3 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.74□□□□□ -2.53
NPIPA2E9PIF3 SCARNA17-201ENST00000516183 144 ntBASIC-0.74□□□□□ -2.53
NPIPA2E9PIF3 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 SNORD75.2-201ENST00000408784 58 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 RNU7-24P-201ENST00000458867 62 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 RNU6-412P-201ENST00000516434 106 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 MIR6773-201ENST00000612812 74 ntBASIC-0.75□□□□□ -2.53
NPIPA2E9PIF3 RNY1P7-201ENST00000384743 110 ntBASIC-0.76□□□□□ -2.53
NPIPA2E9PIF3 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.76□□□□□ -2.53
NPIPA2E9PIF3 snoR1.1-201ENST00000628177 80 ntBASIC-0.76□□□□□ -2.53
NPIPA2E9PIF3 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 SNORD116-14-201ENST00000383894 92 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 SNORD116-17-201ENST00000383929 92 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 SNORD116-15-201ENST00000384445 92 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 SNORD116-19-201ENST00000384729 92 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 MIR518B-201ENST00000385127 83 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 MIRLET7B-201ENST00000385140 83 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 RNA5SP292-201ENST00000390974 118 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 SNORA19.1-201ENST00000410656 129 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 MIR548AX-201ENST00000580117 73 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 MIR5704-201ENST00000584029 77 ntBASIC-0.77□□□□□ -2.53
NPIPA2E9PIF3 RNU6-774P-201ENST00000363238 107 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 SNORD116-21-201ENST00000384507 92 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 RNU6-972P-201ENST00000391208 107 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 RNU6-592P-201ENST00000411333 103 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MTATP6P29-201ENST00000415057 132 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 AC021146.9-201ENST00000512503 156 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 SCARNA23-201ENST00000516060 130 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR3133-201ENST00000583157 78 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR6854-201ENST00000614935 69 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.78□□□□□ -2.53
NPIPA2E9PIF3 RNU5F-1-201ENST00000362507 117 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 RNU6-209P-201ENST00000384118 107 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 RNU6-887P-201ENST00000410660 100 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 RNU6-904P-201ENST00000516206 101 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 RNU6-881P-201ENST00000516813 102 ntBASIC-0.79□□□□□ -2.54
NPIPA2E9PIF3 RNU6-990P-201ENST00000364385 104 ntBASIC-0.8□□□□□ -2.54
NPIPA2E9PIF3 SNORD115-23-201ENST00000364461 82 ntBASIC-0.8□□□□□ -2.54
NPIPA2E9PIF3 SNORD90-201ENST00000391145 111 ntBASIC-0.8□□□□□ -2.54
NPIPA2E9PIF3 SNORA18.5-201ENST00000516616 101 ntBASIC-0.8□□□□□ -2.54
NPIPA2E9PIF3 AC006254.2-201ENST00000603259 279 ntBASIC-0.8□□□□□ -2.54
NPIPA2E9PIF3 MIR196A1-201ENST00000388006 70 ntBASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 MIR548I1-201ENST00000408810 149 ntBASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 SNORD22.1-201ENST00000516331 125 ntBASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.81□□□□□ -2.54
NPIPA2E9PIF3 RNU4-32P-201ENST00000363404 141 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 SNORD58A-201ENST00000383875 65 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 RNU6-337P-201ENST00000391243 106 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 SNORD57-201ENST00000448188 72 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.82□□□□□ -2.54
NPIPA2E9PIF3 SNORD116-10-201ENST00000363791 102 ntBASIC-0.83□□□□□ -2.54
NPIPA2E9PIF3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.83□□□□□ -2.54
NPIPA2E9PIF3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 385.9 ms