Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNU6-668P-201ENST00000364180 107 ntBASIC1.57□□□□□ -2.16
HRH3Q9Y5N1 MIR4460-201ENST00000577862 86 ntBASIC1.57□□□□□ -2.16
HRH3Q9Y5N1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HRH3Q9Y5N1 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 RNU6-54P-201ENST00000365563 107 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 RNU6V-201ENST00000384105 107 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 MIR200A-201ENST00000384875 90 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 SNORD41.1-201ENST00000391000 69 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 MIR4511-201ENST00000582784 87 ntBASIC1.56□□□□□ -2.16
HRH3Q9Y5N1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 MIR378A-201ENST00000362177 66 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 MIR203A-201ENST00000384836 110 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 MIR7-2-201ENST00000384970 110 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 AP1B1P2-201ENST00000416196 106 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 MIR4255-201ENST00000579351 72 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 AC025627.3-201ENST00000582078 182 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 AC073869.9-201ENST00000641610 120 ntBASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
HRH3Q9Y5N1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
HRH3Q9Y5N1 RNU6-982P-201ENST00000516216 102 ntBASIC1.54□□□□□ -2.16
HRH3Q9Y5N1 snoU13.31-201ENST00000607291 104 ntBASIC1.54□□□□□ -2.16
HRH3Q9Y5N1 SNORD114-4-201ENST00000363962 75 ntBASIC1.53□□□□□ -2.16
HRH3Q9Y5N1 RNU6-260P-201ENST00000384092 107 ntBASIC1.53□□□□□ -2.16
HRH3Q9Y5N1 MT-TY-201ENST00000387409 66 ntBASIC1.52□□□□□ -2.17
HRH3Q9Y5N1 RNU6-141P-201ENST00000410499 105 ntBASIC1.52□□□□□ -2.17
HRH3Q9Y5N1 RNU1-92P-201ENST00000517017 135 ntBASIC1.52□□□□□ -2.17
HRH3Q9Y5N1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 SNORD18A-201ENST00000363753 72 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 RNU6-716P-201ENST00000365621 103 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 MIR19B1-201ENST00000384829 87 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 RNA5SP47-201ENST00000517230 109 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 MIR3678-201ENST00000578455 94 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 MIR3657-201ENST00000584818 117 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 MIR7111-201ENST00000619751 72 ntBASIC1.51□□□□□ -2.17
HRH3Q9Y5N1 Y_RNA.226-201ENST00000364337 114 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 RNU6-726P-201ENST00000364680 107 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 RNU6-1187P-201ENST00000364771 110 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 MIR573-201ENST00000384964 99 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 SNORA40.6-201ENST00000391153 128 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 AC110620.1-201ENST00000416042 228 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 MIR3612-201ENST00000579753 87 ntBASIC1.5□□□□□ -2.17
HRH3Q9Y5N1 RNU6-614P-201ENST00000384369 107 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 MIR1287-201ENST00000408492 90 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 RNU6-321P-201ENST00000410912 106 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 AC079150.2-201ENST00000443733 78 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 U6.59-201ENST00000615686 107 ntBASIC1.49□□□□□ -2.17
HRH3Q9Y5N1 SNORA2.1-201ENST00000363089 137 ntBASIC1.48□□□□□ -2.17
HRH3Q9Y5N1 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
HRH3Q9Y5N1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 RNU1-141P-201ENST00000364623 158 ntBASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 SNORA25.8-201ENST00000364831 128 ntBASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 SNORA8.2-201ENST00000384372 139 ntBASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 RNU6-542P-201ENST00000516405 103 ntBASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 SCARNA16.5-201ENST00000517114 183 ntBASIC1.47□□□□□ -2.17
HRH3Q9Y5N1 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
HRH3Q9Y5N1 RNU6-645P-201ENST00000364649 106 ntBASIC1.46□□□□□ -2.18
HRH3Q9Y5N1 SNORD114-24-201ENST00000365029 72 ntBASIC1.46□□□□□ -2.18
HRH3Q9Y5N1 SNORD42B-201ENST00000458893 67 ntBASIC1.46□□□□□ -2.18
HRH3Q9Y5N1 SNORD124-201ENST00000459577 104 ntBASIC1.45□□□□□ -2.18
HRH3Q9Y5N1 RNU6-1079P-201ENST00000362861 110 ntBASIC1.44□□□□□ -2.18
HRH3Q9Y5N1 Y_RNA.118-201ENST00000363300 101 ntBASIC1.44□□□□□ -2.18
HRH3Q9Y5N1 RNU6-829P-201ENST00000363700 112 ntBASIC1.44□□□□□ -2.18
HRH3Q9Y5N1 TRMT112P2-201ENST00000512910 132 ntBASIC1.44□□□□□ -2.18
HRH3Q9Y5N1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
HRH3Q9Y5N1 RNU6-269P-201ENST00000391077 97 ntBASIC1.43□□□□□ -2.18
HRH3Q9Y5N1 RNA5SP147-201ENST00000516493 109 ntBASIC1.43□□□□□ -2.18
HRH3Q9Y5N1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
HRH3Q9Y5N1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 Y_RNA.250-201ENST00000364542 110 ntBASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 RNU4-45P-201ENST00000365469 141 ntBASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 RNA5SP227-201ENST00000516184 113 ntBASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 AC018659.1-201ENST00000551083 169 ntBASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 AC092634.7-201ENST00000621022 103 ntBASIC1.42□□□□□ -2.18
HRH3Q9Y5N1 RNU6-669P-201ENST00000365575 107 ntBASIC1.41□□□□□ -2.18
HRH3Q9Y5N1 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
HRH3Q9Y5N1 RNU6-1162P-201ENST00000384443 104 ntBASIC1.41□□□□□ -2.18
HRH3Q9Y5N1 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
HRH3Q9Y5N1 BX248123.2-201ENST00000606318 124 ntBASIC1.41□□□□□ -2.18
HRH3Q9Y5N1 RNA5SP192-201ENST00000364404 120 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 Y_RNA.236-201ENST00000364427 111 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 Y_RNA.375-201ENST00000365625 101 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 MIR618-201ENST00000385287 98 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 RNU5B-6P-201ENST00000516765 68 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 SNORD53B-201ENST00000577887 78 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 MIR8070-201ENST00000616510 88 ntBASIC1.4□□□□□ -2.19
HRH3Q9Y5N1 RNA5SP215-201ENST00000363440 122 ntBASIC1.39□□□□□ -2.19
HRH3Q9Y5N1 RNU6-1335P-201ENST00000365426 107 ntBASIC1.39□□□□□ -2.19
HRH3Q9Y5N1 AC011195.1-201ENST00000578177 177 ntBASIC1.39□□□□□ -2.19
HRH3Q9Y5N1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
HRH3Q9Y5N1 RNU6-990P-201ENST00000364385 104 ntBASIC1.38□□□□□ -2.19
HRH3Q9Y5N1 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms