Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 AC079804.2-201ENST00000490376 200 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 SCARNA17.3-201ENST00000516381 125 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 RNA5SP47-201ENST00000517230 109 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA40.16-201ENST00000517238 121 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 AC015712.3-201ENST00000559380 164 ntBASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB13Q9Y5F0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 SNORD18A-201ENST00000363753 72 ntBASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 MIR517C-201ENST00000385103 95 ntBASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 RNU6-1246P-201ENST00000391064 107 ntBASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 RNA5SP233-201ENST00000459153 113 ntBASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PCDHB13Q9Y5F0 SNORA25.8-201ENST00000364831 128 ntBASIC2.34□□□□□ -2.03
PCDHB13Q9Y5F0 RN7SKP223-201ENST00000410582 62 ntBASIC2.34□□□□□ -2.03
PCDHB13Q9Y5F0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
PCDHB13Q9Y5F0 AC008834.1-201ENST00000511612 175 ntBASIC2.33□□□□□ -2.04
PCDHB13Q9Y5F0 SNORA70.22-201ENST00000517160 124 ntBASIC2.33□□□□□ -2.04
PCDHB13Q9Y5F0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHB13Q9Y5F0 MIR548X-201ENST00000580069 75 ntBASIC2.33□□□□□ -2.04
PCDHB13Q9Y5F0 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
PCDHB13Q9Y5F0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB13Q9Y5F0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB13Q9Y5F0 SNORD116-16-201ENST00000384533 92 ntBASIC2.32□□□□□ -2.04
PCDHB13Q9Y5F0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB13Q9Y5F0 MIR7110-201ENST00000612638 86 ntBASIC2.32□□□□□ -2.04
PCDHB13Q9Y5F0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
PCDHB13Q9Y5F0 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
PCDHB13Q9Y5F0 MIR652-201ENST00000385278 98 ntBASIC2.31□□□□□ -2.04
PCDHB13Q9Y5F0 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
PCDHB13Q9Y5F0 Y_RNA.407-201ENST00000383986 113 ntBASIC2.3□□□□□ -2.04
PCDHB13Q9Y5F0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PCDHB13Q9Y5F0 snoU13.26-201ENST00000459452 105 ntBASIC2.29□□□□□ -2.04
PCDHB13Q9Y5F0 CYP3A54P-201ENST00000566950 75 ntBASIC2.29□□□□□ -2.04
PCDHB13Q9Y5F0 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
PCDHB13Q9Y5F0 Y_RNA.74-201ENST00000362911 99 ntBASIC2.28□□□□□ -2.04
PCDHB13Q9Y5F0 MIR582-201ENST00000365731 98 ntBASIC2.28□□□□□ -2.04
PCDHB13Q9Y5F0 SNORA64-201ENST00000384674 134 ntBASIC2.28□□□□□ -2.04
PCDHB13Q9Y5F0 RNU6-1110P-201ENST00000516462 101 ntBASIC2.28□□□□□ -2.04
PCDHB13Q9Y5F0 MIR4648-201ENST00000580107 72 ntBASIC2.28□□□□□ -2.04
PCDHB13Q9Y5F0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PCDHB13Q9Y5F0 RNA5SP432-201ENST00000362480 116 ntBASIC2.27□□□□□ -2.05
PCDHB13Q9Y5F0 MIR548E-201ENST00000408287 88 ntBASIC2.27□□□□□ -2.05
PCDHB13Q9Y5F0 AL356379.1-201ENST00000414105 126 ntBASIC2.27□□□□□ -2.05
PCDHB13Q9Y5F0 AL021921.1-201ENST00000442774 93 ntBASIC2.27□□□□□ -2.05
PCDHB13Q9Y5F0 RNA5SP160-201ENST00000364866 120 ntBASIC2.26□□□□□ -2.05
PCDHB13Q9Y5F0 RNA5SP37-201ENST00000365420 130 ntBASIC2.26□□□□□ -2.05
PCDHB13Q9Y5F0 HMGN2P19-201ENST00000425149 265 ntBASIC2.26□□□□□ -2.05
PCDHB13Q9Y5F0 SCARNA16.5-201ENST00000517114 183 ntBASIC2.26□□□□□ -2.05
PCDHB13Q9Y5F0 AL162376.1-201ENST00000624117 175 ntBASIC2.26□□□□□ -2.05
PCDHB13Q9Y5F0 SNORA40B-201ENST00000385573 128 ntBASIC2.25□□□□□ -2.05
PCDHB13Q9Y5F0 RNU1-92P-201ENST00000517017 135 ntBASIC2.25□□□□□ -2.05
PCDHB13Q9Y5F0 MIR3678-201ENST00000578455 94 ntBASIC2.25□□□□□ -2.05
PCDHB13Q9Y5F0 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
PCDHB13Q9Y5F0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDHB13Q9Y5F0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.24□□□□□ -2.05
PCDHB13Q9Y5F0 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
PCDHB13Q9Y5F0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 RNU6-838P-201ENST00000363399 108 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 SNORD105-201ENST00000386910 85 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 AC002429.1-201ENST00000437672 148 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 RNU6-717P-201ENST00000459076 104 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 U7.7-201ENST00000459276 60 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 RNU6-237P-201ENST00000515985 71 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 RNU6-518P-201ENST00000516056 96 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 MIR548AE1-201ENST00000583292 70 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 U6.96-201ENST00000636425 70 ntBASIC2.23□□□□□ -2.05
PCDHB13Q9Y5F0 MIR545-201ENST00000385085 106 ntBASIC2.22□□□□□ -2.05
PCDHB13Q9Y5F0 SNORD89-201ENST00000390981 114 ntBASIC2.22□□□□□ -2.05
PCDHB13Q9Y5F0 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
PCDHB13Q9Y5F0 Y_RNA.282-201ENST00000364793 102 ntBASIC2.21□□□□□ -2.06
PCDHB13Q9Y5F0 MIR527-201ENST00000385244 85 ntBASIC2.21□□□□□ -2.06
PCDHB13Q9Y5F0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.21□□□□□ -2.06
PCDHB13Q9Y5F0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PCDHB13Q9Y5F0 RNU6-810P-201ENST00000364001 107 ntBASIC2.2□□□□□ -2.06
PCDHB13Q9Y5F0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
PCDHB13Q9Y5F0 MIR516B1-201ENST00000385211 90 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 RNA5SP338-201ENST00000410495 85 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 FABP5P4-201ENST00000437203 171 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 snoU13.15-201ENST00000459407 104 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 MIR4473-201ENST00000583731 91 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
PCDHB13Q9Y5F0 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
PCDHB13Q9Y5F0 RNA5SP489-201ENST00000410986 109 ntBASIC2.17□□□□□ -2.06
PCDHB13Q9Y5F0 AC090617.8-201ENST00000623339 167 ntBASIC2.17□□□□□ -2.06
PCDHB13Q9Y5F0 MIR6828-201ENST00000636181 60 ntBASIC2.17□□□□□ -2.06
PCDHB13Q9Y5F0 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHB13Q9Y5F0 SNORD114-1-201ENST00000362705 72 ntBASIC2.16□□□□□ -2.06
PCDHB13Q9Y5F0 MIR222-201ENST00000384992 110 ntBASIC2.16□□□□□ -2.06
PCDHB13Q9Y5F0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
PCDHB13Q9Y5F0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PCDHB13Q9Y5F0 AC006210.1-201ENST00000424882 111 ntBASIC2.15□□□□□ -2.07
PCDHB13Q9Y5F0 MIR3612-201ENST00000579753 87 ntBASIC2.15□□□□□ -2.07
PCDHB13Q9Y5F0 MIR4769-201ENST00000584126 77 ntBASIC2.15□□□□□ -2.07
PCDHB13Q9Y5F0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHB13Q9Y5F0 RNU6-246P-201ENST00000384702 107 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 219.6 ms