Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 MIR4679-2-201ENST00000578358 77 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 AC145423.2-201ENST00000610631 239 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 MTND4LP9-201ENST00000427694 174 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 RNU6-65P-201ENST00000516332 98 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 AC108676.2-201ENST00000605225 163 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 AL157777.2-201ENST00000258070 137 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 SNORA40-201ENST00000388090 126 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 MIR4280-201ENST00000582178 76 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 MIR4536-1-201ENST00000583537 88 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 AC025521.1-201ENST00000621624 286 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 RNY3P2-201ENST00000362918 102 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-832P-201ENST00000363319 107 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-75P-201ENST00000515944 104 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-772P-201ENST00000516042 105 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 MIR582-201ENST00000365731 98 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 MIR4439-201ENST00000583746 80 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 SNORD50.2-201ENST00000365465 70 ntBASIC-0.69□□□□□ -2.52
CLCF1Q9UBD9 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
CLCF1Q9UBD9 MIR204-201ENST00000385200 110 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 AC068339.1-201ENST00000526965 141 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 AL035470.1-201ENST00000622571 220 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 AL513043.2-201ENST00000573941 143 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 FGF7P7-201ENST00000514120 227 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 MIR8068-201ENST00000618032 68 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 MIR548U-201ENST00000390728 81 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 MIR548E-201ENST00000408287 88 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-257P-201ENST00000410238 98 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-719P-201ENST00000516671 104 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-644P-201ENST00000391155 98 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU7-85P-201ENST00000458851 63 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 AC021146.6-201ENST00000514659 117 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 MIR5009-201ENST00000578736 100 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU6-813P-201ENST00000384691 107 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 RNU6-476P-201ENST00000384726 107 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 SNORD42B-201ENST00000458893 67 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 HAR1A.1-201ENST00000459583 118 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 MIR224-201ENST00000384889 81 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 RNU7-107P-201ENST00000459121 61 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 MIR3613-201ENST00000579844 87 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 SNORA63.2-201ENST00000362603 126 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 AC103810.7-201ENST00000607821 91 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 MIR3914-2-201ENST00000637339 95 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNU6-132P-201ENST00000383863 107 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNY1P5-201ENST00000383890 115 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 MIR548A1-201ENST00000385041 97 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 U6.95-201ENST00000636931 70 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNU4-36P-201ENST00000364294 144 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 RNU6-80P-201ENST00000384195 107 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 MIR548A3-201ENST00000385297 97 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 RNU6-971P-201ENST00000516920 106 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 MIR3064-201ENST00000581130 66 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.8□□□□□ -2.54
CLCF1Q9UBD9 RNU6-905P-201ENST00000384434 107 ntBASIC-0.8□□□□□ -2.54
CLCF1Q9UBD9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms