Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 MIR4679-2-201ENST00000578358 77 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 AC145423.2-201ENST00000610631 239 ntBASIC-0.64□□□□□ -2.51
CLCF1Q9UBD9 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 MTND4LP9-201ENST00000427694 174 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 RNU6-65P-201ENST00000516332 98 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 AC108676.2-201ENST00000605225 163 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.65□□□□□ -2.51
CLCF1Q9UBD9 AL157777.2-201ENST00000258070 137 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 SNORD115-25-201ENST00000362619 82 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 SNORA40-201ENST00000388090 126 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 MIR4280-201ENST00000582178 76 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 MIR4536-1-201ENST00000583537 88 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 AC025521.1-201ENST00000621624 286 ntBASIC-0.66□□□□□ -2.52
CLCF1Q9UBD9 RNY3P2-201ENST00000362918 102 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-832P-201ENST00000363319 107 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-75P-201ENST00000515944 104 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-772P-201ENST00000516042 105 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
CLCF1Q9UBD9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 MIR582-201ENST00000365731 98 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 MIR4439-201ENST00000583746 80 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.68□□□□□ -2.52
CLCF1Q9UBD9 SNORD50.2-201ENST00000365465 70 ntBASIC-0.69□□□□□ -2.52
CLCF1Q9UBD9 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
CLCF1Q9UBD9 MIR204-201ENST00000385200 110 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 AC068339.1-201ENST00000526965 141 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 AL035470.1-201ENST00000622571 220 ntBASIC-0.7□□□□□ -2.52
CLCF1Q9UBD9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 AL513043.2-201ENST00000573941 143 ntBASIC-0.71□□□□□ -2.52
CLCF1Q9UBD9 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 FGF7P7-201ENST00000514120 227 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 MIR8068-201ENST00000618032 68 ntBASIC-0.72□□□□□ -2.52
CLCF1Q9UBD9 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 MIR548U-201ENST00000390728 81 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 MIR548E-201ENST00000408287 88 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-257P-201ENST00000410238 98 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-719P-201ENST00000516671 104 ntBASIC-0.73□□□□□ -2.53
CLCF1Q9UBD9 RNU6-644P-201ENST00000391155 98 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU7-85P-201ENST00000458851 63 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 AC021146.6-201ENST00000514659 117 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 MIR5009-201ENST00000578736 100 ntBASIC-0.74□□□□□ -2.53
CLCF1Q9UBD9 RNU6-813P-201ENST00000384691 107 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 RNU6-476P-201ENST00000384726 107 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 SNORD42B-201ENST00000458893 67 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 HAR1A.1-201ENST00000459583 118 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 SNORD114-15-201ENST00000364687 72 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 MIR224-201ENST00000384889 81 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 RNU7-107P-201ENST00000459121 61 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 MIR3613-201ENST00000579844 87 ntBASIC-0.76□□□□□ -2.53
CLCF1Q9UBD9 SNORA63.2-201ENST00000362603 126 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 AC103810.7-201ENST00000607821 91 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 MIR3914-2-201ENST00000637339 95 ntBASIC-0.77□□□□□ -2.53
CLCF1Q9UBD9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNU6-132P-201ENST00000383863 107 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNY1P5-201ENST00000383890 115 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 MIR548A1-201ENST00000385041 97 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 U6.95-201ENST00000636931 70 ntBASIC-0.78□□□□□ -2.53
CLCF1Q9UBD9 RNU4-36P-201ENST00000364294 144 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 RNU6-80P-201ENST00000384195 107 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 MIR548A3-201ENST00000385297 97 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 RNU6-971P-201ENST00000516920 106 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 MIR3064-201ENST00000581130 66 ntBASIC-0.79□□□□□ -2.54
CLCF1Q9UBD9 SNORD114-25-201ENST00000363742 72 ntBASIC-0.8□□□□□ -2.54
CLCF1Q9UBD9 RNU6-905P-201ENST00000384434 107 ntBASIC-0.8□□□□□ -2.54
CLCF1Q9UBD9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 288.5 ms