Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
FOXD4L1Q9NU39 MIR4285-201ENST00000581001 85 ntBASIC2.57□□□□□ -2
FOXD4L1Q9NU39 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FOXD4L1Q9NU39 Y_RNA.125-201ENST00000363371 111 ntBASIC2.56□□□□□ -2
FOXD4L1Q9NU39 MIR200A-201ENST00000384875 90 ntBASIC2.56□□□□□ -2
FOXD4L1Q9NU39 RNA5SP227-201ENST00000516184 113 ntBASIC2.56□□□□□ -2
FOXD4L1Q9NU39 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
FOXD4L1Q9NU39 RNU6-520P-201ENST00000384717 104 ntBASIC2.55□□□□□ -2
FOXD4L1Q9NU39 Y_RNA.633-201ENST00000459107 95 ntBASIC2.55□□□□□ -2
FOXD4L1Q9NU39 AC025627.3-201ENST00000582078 182 ntBASIC2.55□□□□□ -2
FOXD4L1Q9NU39 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
FOXD4L1Q9NU39 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
FOXD4L1Q9NU39 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
FOXD4L1Q9NU39 RNU6-1312P-201ENST00000362425 108 ntBASIC2.53□□□□□ -2
FOXD4L1Q9NU39 MIR652-201ENST00000385278 98 ntBASIC2.52□□□□□ -2.01
FOXD4L1Q9NU39 AC006210.1-201ENST00000424882 111 ntBASIC2.52□□□□□ -2.01
FOXD4L1Q9NU39 U4.4-201ENST00000620626 117 ntBASIC2.52□□□□□ -2.01
FOXD4L1Q9NU39 MIR6828-201ENST00000636181 60 ntBASIC2.52□□□□□ -2.01
FOXD4L1Q9NU39 MIR19B1-201ENST00000384829 87 ntBASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 MIR1261-201ENST00000408659 82 ntBASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 HMGN2P38-201ENST00000423806 265 ntBASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 MIR6715A-201ENST00000615929 79 ntBASIC2.51□□□□□ -2.01
FOXD4L1Q9NU39 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.5□□□□□ -2.01
FOXD4L1Q9NU39 MIR517C-201ENST00000385103 95 ntBASIC2.5□□□□□ -2.01
FOXD4L1Q9NU39 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.5□□□□□ -2.01
FOXD4L1Q9NU39 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.49□□□□□ -2.01
FOXD4L1Q9NU39 MIR4473-201ENST00000583731 91 ntBASIC2.49□□□□□ -2.01
FOXD4L1Q9NU39 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXD4L1Q9NU39 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
FOXD4L1Q9NU39 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.48□□□□□ -2.01
FOXD4L1Q9NU39 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
FOXD4L1Q9NU39 SNORD110-201ENST00000408189 75 ntBASIC2.47□□□□□ -2.01
FOXD4L1Q9NU39 SNORD124-201ENST00000459577 104 ntBASIC2.47□□□□□ -2.01
FOXD4L1Q9NU39 AC104984.5-201ENST00000586878 94 ntBASIC2.46□□□□□ -2.02
FOXD4L1Q9NU39 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.46□□□□□ -2.02
FOXD4L1Q9NU39 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
FOXD4L1Q9NU39 SNORA26.9-201ENST00000391322 122 ntBASIC2.45□□□□□ -2.02
FOXD4L1Q9NU39 RNU7-119P-201ENST00000459279 63 ntBASIC2.45□□□□□ -2.02
FOXD4L1Q9NU39 RNA5SP364-201ENST00000516938 78 ntBASIC2.45□□□□□ -2.02
FOXD4L1Q9NU39 Y_RNA.783-201ENST00000613546 102 ntBASIC2.45□□□□□ -2.02
FOXD4L1Q9NU39 Y_RNA.246-201ENST00000364495 108 ntBASIC2.44□□□□□ -2.02
FOXD4L1Q9NU39 RNA5SP200-201ENST00000516360 103 ntBASIC2.44□□□□□ -2.02
FOXD4L1Q9NU39 MIR6132-201ENST00000622083 109 ntBASIC2.44□□□□□ -2.02
FOXD4L1Q9NU39 MIR548E-201ENST00000408287 88 ntBASIC2.43□□□□□ -2.02
FOXD4L1Q9NU39 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
FOXD4L1Q9NU39 RNU4-52P-201ENST00000384209 138 ntBASIC2.42□□□□□ -2.02
FOXD4L1Q9NU39 RNA5SP268-201ENST00000516828 124 ntBASIC2.42□□□□□ -2.02
FOXD4L1Q9NU39 MIR3945-201ENST00000581853 98 ntBASIC2.42□□□□□ -2.02
FOXD4L1Q9NU39 MIR548AE1-201ENST00000583292 70 ntBASIC2.42□□□□□ -2.02
FOXD4L1Q9NU39 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
FOXD4L1Q9NU39 SNORA70B-201ENST00000384210 135 ntBASIC2.41□□□□□ -2.02
FOXD4L1Q9NU39 RNU4-53P-201ENST00000410828 140 ntBASIC2.41□□□□□ -2.02
FOXD4L1Q9NU39 U6.96-201ENST00000636425 70 ntBASIC2.41□□□□□ -2.02
FOXD4L1Q9NU39 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 SNORA25.8-201ENST00000364831 128 ntBASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 RNU4-45P-201ENST00000365469 141 ntBASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 Y_RNA.379-201ENST00000365653 102 ntBASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 MIR582-201ENST00000365731 98 ntBASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 MIR6873-201ENST00000622788 63 ntBASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
FOXD4L1Q9NU39 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
FOXD4L1Q9NU39 SNORA48.3-201ENST00000391081 134 ntBASIC2.39□□□□□ -2.03
FOXD4L1Q9NU39 AC011195.1-201ENST00000578177 177 ntBASIC2.39□□□□□ -2.03
FOXD4L1Q9NU39 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
FOXD4L1Q9NU39 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
FOXD4L1Q9NU39 MIR18A-201ENST00000362310 71 ntBASIC2.38□□□□□ -2.03
FOXD4L1Q9NU39 SNORD114-24-201ENST00000365029 72 ntBASIC2.37□□□□□ -2.03
FOXD4L1Q9NU39 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.37□□□□□ -2.03
FOXD4L1Q9NU39 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
FOXD4L1Q9NU39 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
FOXD4L1Q9NU39 MIR548AD-201ENST00000584780 82 ntBASIC2.36□□□□□ -2.03
FOXD4L1Q9NU39 SNORA36.1-201ENST00000363424 132 ntBASIC2.35□□□□□ -2.03
FOXD4L1Q9NU39 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
FOXD4L1Q9NU39 CYP3A54P-201ENST00000566950 75 ntBASIC2.35□□□□□ -2.03
FOXD4L1Q9NU39 Y_RNA.325-201ENST00000365171 122 ntBASIC2.34□□□□□ -2.03
FOXD4L1Q9NU39 AL021921.1-201ENST00000442774 93 ntBASIC2.34□□□□□ -2.03
FOXD4L1Q9NU39 RNU6-548P-201ENST00000517083 115 ntBASIC2.34□□□□□ -2.03
FOXD4L1Q9NU39 SNORA9.1-201ENST00000362412 131 ntBASIC2.33□□□□□ -2.04
FOXD4L1Q9NU39 SNORA41B-201ENST00000384785 128 ntBASIC2.33□□□□□ -2.04
FOXD4L1Q9NU39 SNORD99-201ENST00000408612 74 ntBASIC2.33□□□□□ -2.04
FOXD4L1Q9NU39 RNA5SP255-201ENST00000516370 107 ntBASIC2.33□□□□□ -2.04
FOXD4L1Q9NU39 RNU4-88P-201ENST00000411220 86 ntBASIC2.31□□□□□ -2.04
FOXD4L1Q9NU39 RNA5SP94-201ENST00000516917 108 ntBASIC2.31□□□□□ -2.04
FOXD4L1Q9NU39 MIR7107-201ENST00000611489 80 ntBASIC2.31□□□□□ -2.04
FOXD4L1Q9NU39 snoU13.26-201ENST00000459452 105 ntBASIC2.3□□□□□ -2.04
FOXD4L1Q9NU39 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 MIR618-201ENST00000385287 98 ntBASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 RNU6-231P-201ENST00000517122 103 ntBASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 uc_338.20-201ENST00000621563 178 ntBASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 MIR7843-201ENST00000622274 79 ntBASIC2.29□□□□□ -2.04
FOXD4L1Q9NU39 MIR516B1-201ENST00000385211 90 ntBASIC2.28□□□□□ -2.04
FOXD4L1Q9NU39 RNU6-518P-201ENST00000516056 96 ntBASIC2.28□□□□□ -2.04
FOXD4L1Q9NU39 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXD4L1Q9NU39 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
FOXD4L1Q9NU39 RN7SKP223-201ENST00000410582 62 ntBASIC2.26□□□□□ -2.05
FOXD4L1Q9NU39 MIR4648-201ENST00000580107 72 ntBASIC2.26□□□□□ -2.05
FOXD4L1Q9NU39 AC243829.6-201ENST00000612652 106 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 232.3 ms