Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORA77B-201ENST00000578179 125 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
TRIM47Q96LD4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
TRIM47Q96LD4 MIR545-201ENST00000385085 106 ntBASIC2.05□□□□□ -2.08
TRIM47Q96LD4 uc_338.16-201ENST00000621804 95 ntBASIC2.05□□□□□ -2.08
TRIM47Q96LD4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TRIM47Q96LD4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM47Q96LD4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR676-201ENST00000390702 67 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 SNORD116.2-201ENST00000391251 93 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR1276-201ENST00000408707 83 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 MIR6504-201ENST00000613520 61 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 AC067863.3-201ENST00000624172 122 ntBASIC2.03□□□□□ -2.08
TRIM47Q96LD4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TRIM47Q96LD4 SNORA40.16-201ENST00000517238 121 ntBASIC2.02□□□□□ -2.09
TRIM47Q96LD4 MIR4804-201ENST00000581683 73 ntBASIC2.02□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.174-201ENST00000363781 105 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MT-TY-201ENST00000387409 66 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TRIM47Q96LD4 SNORD111-201ENST00000408139 94 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MIR4419B-201ENST00000577260 68 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 AL157834.3-201ENST00000615543 103 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.325-201ENST00000365171 122 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 RNU7-74P-201ENST00000459104 62 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 AC023827.1-201ENST00000569247 97 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR4460-201ENST00000577862 86 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR548X-201ENST00000580069 75 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 MIR4713-201ENST00000582691 75 ntBASIC2□□□□□ -2.09
TRIM47Q96LD4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.246-201ENST00000364495 108 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU6-392P-201ENST00000364926 101 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA33.1-201ENST00000364957 130 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU1-119P-201ENST00000391122 165 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA75.2-201ENST00000391138 150 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORA75.3-201ENST00000391231 150 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 RNU6-165P-201ENST00000517170 99 ntBASIC1.99□□□□□ -2.09
TRIM47Q96LD4 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRIM47Q96LD4 SNORD114-4-201ENST00000363962 75 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 RNU7-56P-201ENST00000458744 62 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 AC019176.1-201ENST00000518519 225 ntBASIC1.98□□□□□ -2.09
TRIM47Q96LD4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
TRIM47Q96LD4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TRIM47Q96LD4 Y_RNA.125-201ENST00000363371 111 ntBASIC1.97□□□□□ -2.09
TRIM47Q96LD4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TRIM47Q96LD4 AC012493.3-201ENST00000604494 112 ntBASIC1.97□□□□□ -2.09
TRIM47Q96LD4 SNORA9.1-201ENST00000362412 131 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 RNU6-838P-201ENST00000363399 108 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 RNU6-1246P-201ENST00000391064 107 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORA31.2-201ENST00000516019 134 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORD53B-201ENST00000577887 78 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 AL136317.1-201ENST00000612653 226 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 MIR8074-201ENST00000615081 81 ntBASIC1.96□□□□□ -2.1
TRIM47Q96LD4 SNORA15B-2-201ENST00000384058 135 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 SNORA15B-1-201ENST00000384334 135 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 AC048334.1-201ENST00000477975 159 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 MIR7110-201ENST00000612638 86 ntBASIC1.95□□□□□ -2.1
TRIM47Q96LD4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.95□□□□□ -2.1
TRIM47Q96LD4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRIM47Q96LD4 RNU6-42P-201ENST00000384165 107 ntBASIC1.94□□□□□ -2.1
TRIM47Q96LD4 RNU6-994P-201ENST00000410507 111 ntBASIC1.94□□□□□ -2.1
TRIM47Q96LD4 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 MIR100-201ENST00000385259 80 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 SNORD41.1-201ENST00000391000 69 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.93□□□□□ -2.1
TRIM47Q96LD4 Y_RNA.633-201ENST00000459107 95 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.93□□□□□ -2.1
TRIM47Q96LD4 MIR302D-201ENST00000362275 68 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 RNU1-42P-201ENST00000364033 160 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 SNORA40B-201ENST00000385573 128 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 MIR4452-201ENST00000583004 71 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.92□□□□□ -2.1
TRIM47Q96LD4 RNU1-141P-201ENST00000364623 158 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 SNORD116-16-201ENST00000384533 92 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 MIR520F-201ENST00000384824 87 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.91□□□□□ -2.1
TRIM47Q96LD4 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.91□□□□□ -2.1
TRIM47Q96LD4 SNORA7.1-201ENST00000363750 139 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 SNORA25.8-201ENST00000364831 128 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 RNU6-724P-201ENST00000390958 105 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MIR548L-201ENST00000408303 86 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 AC079140.2-201ENST00000506193 142 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 RNA5SP220-201ENST00000516298 104 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MIR3937-201ENST00000580135 106 ntBASIC1.9□□□□□ -2.11
TRIM47Q96LD4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRIM47Q96LD4 SNORD1A-201ENST00000364968 72 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 Y_RNA.540-201ENST00000384638 111 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 MIR758-201ENST00000390227 88 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-1250P-201ENST00000391218 107 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 SNORA44.1-201ENST00000517031 108 ntBASIC1.89□□□□□ -2.11
TRIM47Q96LD4 RNU6-810P-201ENST00000364001 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms