Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR6828-201ENST00000636181 60 ntBASIC2.25□□□□□ -2.05
MS4A3Q96HJ5 RNU6-828P-201ENST00000364876 107 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 SNORD12-201ENST00000391002 90 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 SNORD110-201ENST00000408189 75 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 RNU6-721P-201ENST00000410155 105 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 AC079804.2-201ENST00000490376 200 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 RNA5SP282-201ENST00000516355 108 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 RNA5SP470-201ENST00000516463 106 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 MIR6852-201ENST00000621699 66 ntBASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
MS4A3Q96HJ5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
MS4A3Q96HJ5 RNU1-78P-201ENST00000391248 165 ntBASIC2.23□□□□□ -2.05
MS4A3Q96HJ5 MIR3198-2-201ENST00000577868 80 ntBASIC2.23□□□□□ -2.05
MS4A3Q96HJ5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.23□□□□□ -2.05
MS4A3Q96HJ5 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
MS4A3Q96HJ5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 SNORD2-201ENST00000459163 69 ntBASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 RNA5SP320-201ENST00000516263 124 ntBASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 RNU6-1110P-201ENST00000516462 101 ntBASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 MIR6817-201ENST00000615588 66 ntBASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
MS4A3Q96HJ5 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
MS4A3Q96HJ5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 RNA5SP68-201ENST00000363885 119 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 SNORD105-201ENST00000386910 85 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 AC244090.1-201ENST00000441884 93 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 RNA5SP148-201ENST00000516527 94 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 MIR3162-201ENST00000581818 82 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 MIR4422-201ENST00000581938 83 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 MIR4672-201ENST00000583126 81 ntBASIC2.21□□□□□ -2.06
MS4A3Q96HJ5 SNORA70.22-201ENST00000517160 124 ntBASIC2.2□□□□□ -2.06
MS4A3Q96HJ5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.2□□□□□ -2.06
MS4A3Q96HJ5 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 UBE2DNL-203ENST00000474922 222 ntBASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 AC025627.3-201ENST00000582078 182 ntBASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.19□□□□□ -2.06
MS4A3Q96HJ5 MIR20A-201ENST00000362279 71 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 RNU6-598P-201ENST00000364017 105 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 MIR27B-201ENST00000385129 97 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 RNU6-337P-201ENST00000391243 106 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 SNORA26.9-201ENST00000391322 122 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 RNA5SP227-201ENST00000516184 113 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 U2.18-201ENST00000622185 84 ntBASIC2.18□□□□□ -2.06
MS4A3Q96HJ5 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 RNU6-945P-201ENST00000383947 107 ntBASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 MIR125B1-201ENST00000385236 88 ntBASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 RNU6-995P-201ENST00000391244 107 ntBASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 RPL23AP94-201ENST00000512518 302 ntBASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 MIR6895-201ENST00000613497 78 ntBASIC2.17□□□□□ -2.06
MS4A3Q96HJ5 SNORD89-201ENST00000390981 114 ntBASIC2.16□□□□□ -2.06
MS4A3Q96HJ5 MIR5092-201ENST00000583139 88 ntBASIC2.16□□□□□ -2.06
MS4A3Q96HJ5 MIR6773-201ENST00000612812 74 ntBASIC2.16□□□□□ -2.06
MS4A3Q96HJ5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
MS4A3Q96HJ5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.15□□□□□ -2.07
MS4A3Q96HJ5 SNORD45.2-201ENST00000363552 72 ntBASIC2.15□□□□□ -2.07
MS4A3Q96HJ5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.15□□□□□ -2.07
MS4A3Q96HJ5 MIR449A-201ENST00000362113 91 ntBASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 MIR21-201ENST00000362134 72 ntBASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 MIR573-201ENST00000384964 99 ntBASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 MIR3612-201ENST00000579753 87 ntBASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
MS4A3Q96HJ5 RNA5SP456-201ENST00000364002 114 ntBASIC2.13□□□□□ -2.07
MS4A3Q96HJ5 MIR548AA1-201ENST00000384971 97 ntBASIC2.13□□□□□ -2.07
MS4A3Q96HJ5 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC2.13□□□□□ -2.07
MS4A3Q96HJ5 RNU6-59P-201ENST00000384787 107 ntBASIC2.12□□□□□ -2.07
MS4A3Q96HJ5 AC002429.1-201ENST00000437672 148 ntBASIC2.12□□□□□ -2.07
MS4A3Q96HJ5 AC138207.3-201ENST00000585289 166 ntBASIC2.12□□□□□ -2.07
MS4A3Q96HJ5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
MS4A3Q96HJ5 MIR17-201ENST00000385012 84 ntBASIC2.11□□□□□ -2.07
MS4A3Q96HJ5 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 RNA5SP289-201ENST00000362332 137 ntBASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 FABP5P4-201ENST00000437203 171 ntBASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 MIR5694-201ENST00000581190 76 ntBASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
MS4A3Q96HJ5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
MS4A3Q96HJ5 AC026436.1-201ENST00000510537 270 ntBASIC2.09□□□□□ -2.07
MS4A3Q96HJ5 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
MS4A3Q96HJ5 MIR222-201ENST00000384992 110 ntBASIC2.08□□□□□ -2.08
MS4A3Q96HJ5 MIRLET7B-201ENST00000385140 83 ntBASIC2.08□□□□□ -2.08
MS4A3Q96HJ5 SNORA17.3-201ENST00000391159 129 ntBASIC2.08□□□□□ -2.08
MS4A3Q96HJ5 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
MS4A3Q96HJ5 AP000553.5-201ENST00000641933 54 ntBASIC2.08□□□□□ -2.08
MS4A3Q96HJ5 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
MS4A3Q96HJ5 SNORD114-30-201ENST00000364448 72 ntBASIC2.07□□□□□ -2.08
MS4A3Q96HJ5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MS4A3Q96HJ5 RNA5SP94-201ENST00000516917 108 ntBASIC2.07□□□□□ -2.08
MS4A3Q96HJ5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 Y_RNA.139-201ENST00000363464 102 ntBASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 AC008834.1-201ENST00000511612 175 ntBASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 RNA5SP268-201ENST00000516828 124 ntBASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.06□□□□□ -2.08
MS4A3Q96HJ5 RNY1P8-201ENST00000383970 114 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms