Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 RNU6-431P-201ENST00000383874 107 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR518B-201ENST00000385127 83 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 RNU7-85P-201ENST00000458851 63 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR3613-201ENST00000579844 87 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 AC025521.1-201ENST00000621624 286 ntBASIC-0.64□□□□□ -2.51
VPS33AQ96AX1 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 RNU6-132P-201ENST00000383863 107 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR451A-201ENST00000385059 72 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR517B-201ENST00000385102 67 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR196A1-201ENST00000388006 70 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 SNORD90-201ENST00000391145 111 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR3140-201ENST00000583685 90 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR6773-201ENST00000612812 74 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR6854-201ENST00000614935 69 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 MIR7111-201ENST00000619751 72 ntBASIC-0.65□□□□□ -2.51
VPS33AQ96AX1 RNA5SP257-201ENST00000363023 116 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 RNU6-990P-201ENST00000364385 104 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 RNU6-935P-201ENST00000410371 100 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 MTND4LP9-201ENST00000427694 174 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 MIR4679-2-201ENST00000578358 77 ntBASIC-0.66□□□□□ -2.52
VPS33AQ96AX1 SNORA24B-201ENST00000384176 131 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 SNORA40-201ENST00000388090 126 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 snosnR66.1-201ENST00000391095 99 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 AP000533.3-201ENST00000447704 118 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 RNA5SP272-201ENST00000516095 111 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 MIR4694-201ENST00000578534 80 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 MIR4464-201ENST00000580818 92 ntBASIC-0.67□□□□□ -2.52
VPS33AQ96AX1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 MIRLET7B-201ENST00000385140 83 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 SNORD64-201ENST00000386683 67 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 AC022137.1-201ENST00000483735 151 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 RNU6-772P-201ENST00000516042 105 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.68□□□□□ -2.52
VPS33AQ96AX1 RNU6-495P-201ENST00000362995 107 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 MIR577-201ENST00000385196 96 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 AC021146.6-201ENST00000514659 117 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 RNU7-200P-201ENST00000516105 62 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.69□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.7□□□□□ -2.52
VPS33AQ96AX1 MIR147A-201ENST00000385079 72 ntBASIC-0.7□□□□□ -2.52
VPS33AQ96AX1 FGF7P7-201ENST00000514120 227 ntBASIC-0.7□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 U3.27-201ENST00000391237 200 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 SNORA13-201ENST00000458790 133 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 AL513043.2-201ENST00000573941 143 ntBASIC-0.71□□□□□ -2.52
VPS33AQ96AX1 AL157777.2-201ENST00000258070 137 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 MIR548Z-201ENST00000584743 97 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 MIR4499-201ENST00000584834 69 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 MIR382-201ENST00000637119 76 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 MIR6759-201ENST00000638110 65 ntBASIC-0.72□□□□□ -2.52
VPS33AQ96AX1 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 MIR124-2-201ENST00000385081 109 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 MIR3064-201ENST00000581130 66 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 MIR6888-201ENST00000621977 67 ntBASIC-0.73□□□□□ -2.53
VPS33AQ96AX1 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 RNU6-832P-201ENST00000363319 107 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 RNA5SP292-201ENST00000390974 118 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 YWHAEP3-201ENST00000582767 121 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 MIR4536-1-201ENST00000583537 88 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 MIR4439-201ENST00000583746 80 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 AL035470.1-201ENST00000622571 220 ntBASIC-0.74□□□□□ -2.53
VPS33AQ96AX1 SNORA63.2-201ENST00000362603 126 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 RNY3P2-201ENST00000362918 102 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 SNORA63.6-201ENST00000364921 119 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 RNY1P7-201ENST00000384743 110 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 AL078595.1-201ENST00000404458 226 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 RNU6-257P-201ENST00000410238 98 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 SNORD4B-201ENST00000459083 72 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 AP001180.6-201ENST00000584918 159 ntBASIC-0.75□□□□□ -2.53
VPS33AQ96AX1 SNORD114-4-201ENST00000363962 75 ntBASIC-0.76□□□□□ -2.53
VPS33AQ96AX1 RNA5SP451-201ENST00000410588 110 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 165.6 ms