Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
PTP4A1Q93096 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 RNU4-63P-201ENST00000411313 118 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 MIR6086-201ENST00000638065 55 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 MTND5P18-201ENST00000445624 1801 ntBASIC-1.11□□□□□ -2.59
PTP4A1Q93096 SNORD114-15-201ENST00000364687 72 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 SNORD83B-201ENST00000386745 93 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 RNU6-721P-201ENST00000410155 105 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 RNU7-55P-201ENST00000459426 62 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 SNORD38.3-201ENST00000516599 73 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 MIR4536-1-201ENST00000583537 88 ntBASIC-1.12□□□□□ -2.59
PTP4A1Q93096 SNORD58C-201ENST00000365223 64 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 SCARNA17-201ENST00000516183 144 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 RNU6-182P-201ENST00000516970 105 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 MIR4719-201ENST00000585233 84 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 RNU6-86P-201ENST00000606534 107 ntBASIC-1.13□□□□□ -2.59
PTP4A1Q93096 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.14□□□□□ -2.59
PTP4A1Q93096 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.14□□□□□ -2.59
PTP4A1Q93096 MIR4694-201ENST00000578534 80 ntBASIC-1.14□□□□□ -2.59
PTP4A1Q93096 MIR3144-201ENST00000579460 79 ntBASIC-1.14□□□□□ -2.59
PTP4A1Q93096 snoU13.13-201ENST00000458842 104 ntBASIC-1.15□□□□□ -2.59
PTP4A1Q93096 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.15□□□□□ -2.59
PTP4A1Q93096 AC145423.2-201ENST00000610631 239 ntBASIC-1.15□□□□□ -2.59
PTP4A1Q93096 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 RNU6-54P-201ENST00000365563 107 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 MIR569-201ENST00000385228 96 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 RNU6-762P-201ENST00000517107 102 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 MIR3681-201ENST00000580089 72 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.16□□□□□ -2.6
PTP4A1Q93096 RNY4P3-201ENST00000365254 95 ntBASIC-1.17□□□□□ -2.6
PTP4A1Q93096 RNU6-804P-201ENST00000384286 107 ntBASIC-1.17□□□□□ -2.6
PTP4A1Q93096 MIR518B-201ENST00000385127 83 ntBASIC-1.17□□□□□ -2.6
PTP4A1Q93096 SNORA49-201ENST00000386157 136 ntBASIC-1.17□□□□□ -2.6
PTP4A1Q93096 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.17□□□□□ -2.6
PTP4A1Q93096 RNU6-973P-201ENST00000364690 107 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 AL500527.2-201ENST00000454105 95 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 MIR3179-1-201ENST00000578940 84 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 MIR3179-2-201ENST00000579107 84 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 MIR3179-3-201ENST00000579566 84 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.18□□□□□ -2.6
PTP4A1Q93096 MIR4439-201ENST00000583746 80 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 AL353621.2-201ENST00000605340 133 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 MIR3179-4-201ENST00000617599 84 ntBASIC-1.18□□□□□ -2.6
PTP4A1Q93096 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.19□□□□□ -2.6
PTP4A1Q93096 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.19□□□□□ -2.6
PTP4A1Q93096 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.19□□□□□ -2.6
PTP4A1Q93096 MIR577-201ENST00000385196 96 ntBASIC-1.19□□□□□ -2.6
PTP4A1Q93096 MIR4679-2-201ENST00000578358 77 ntBASIC-1.19□□□□□ -2.6
PTP4A1Q93096 SNORD114-25-201ENST00000363742 72 ntBASIC-1.2□□□□□ -2.6
PTP4A1Q93096 MIR548U-201ENST00000390728 81 ntBASIC-1.2□□□□□ -2.6
PTP4A1Q93096 RNU6-75P-201ENST00000515944 104 ntBASIC-1.2□□□□□ -2.6
PTP4A1Q93096 AC025521.1-201ENST00000621624 286 ntBASIC-1.2□□□□□ -2.6
PTP4A1Q93096 RNY3P2-201ENST00000362918 102 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 RNU6-832P-201ENST00000363319 107 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 SNORD50.2-201ENST00000365465 70 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 MIR548E-201ENST00000408287 88 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 FGF7P7-201ENST00000514120 227 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 MIR548AX-201ENST00000580117 73 ntBASIC-1.21□□□□□ -2.6
PTP4A1Q93096 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.22□□□□□ -2.6
PTP4A1Q93096 snoU13.19-201ENST00000459148 104 ntBASIC-1.22□□□□□ -2.6
PTP4A1Q93096 MIR4499-201ENST00000584834 69 ntBASIC-1.22□□□□□ -2.6
PTP4A1Q93096 snoR1.1-201ENST00000628177 80 ntBASIC-1.22□□□□□ -2.6
PTP4A1Q93096 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.23□□□□□ -2.61
PTP4A1Q93096 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.23□□□□□ -2.61
PTP4A1Q93096 SNORD45B-201ENST00000364617 72 ntBASIC-1.23□□□□□ -2.61
PTP4A1Q93096 SNORD22.1-201ENST00000516331 125 ntBASIC-1.23□□□□□ -2.61
PTP4A1Q93096 SNORD74.6-201ENST00000364796 70 ntBASIC-1.24□□□□□ -2.61
PTP4A1Q93096 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.24□□□□□ -2.61
PTP4A1Q93096 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.25□□□□□ -2.61
PTP4A1Q93096 MIR582-201ENST00000365731 98 ntBASIC-1.25□□□□□ -2.61
PTP4A1Q93096 MIR147A-201ENST00000385079 72 ntBASIC-1.25□□□□□ -2.61
PTP4A1Q93096 SCARNA18B-201ENST00000458806 135 ntBASIC-1.25□□□□□ -2.61
PTP4A1Q93096 uc_338.19-201ENST00000616808 99 ntBASIC-1.25□□□□□ -2.61
PTP4A1Q93096 AL157777.2-201ENST00000258070 137 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 RNU6-431P-201ENST00000383874 107 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 AC022137.1-201ENST00000483735 151 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 RNA5SP476-201ENST00000516613 103 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 RNU6-719P-201ENST00000516671 104 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 AL513043.2-201ENST00000573941 143 ntBASIC-1.26□□□□□ -2.61
PTP4A1Q93096 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.27□□□□□ -2.61
PTP4A1Q93096 MIR517B-201ENST00000385102 67 ntBASIC-1.27□□□□□ -2.61
PTP4A1Q93096 SNORA40-201ENST00000388090 126 ntBASIC-1.27□□□□□ -2.61
PTP4A1Q93096 RNU6-426P-201ENST00000516464 97 ntBASIC-1.27□□□□□ -2.61
PTP4A1Q93096 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.28□□□□□ -2.61
PTP4A1Q93096 SNORA63.2-201ENST00000362603 126 ntBASIC-1.28□□□□□ -2.61
PTP4A1Q93096 RNU6-772P-201ENST00000516042 105 ntBASIC-1.28□□□□□ -2.61
PTP4A1Q93096 AC068339.1-201ENST00000526965 141 ntBASIC-1.28□□□□□ -2.61
PTP4A1Q93096 SNORD64-201ENST00000386683 67 ntBASIC-1.29□□□□□ -2.62
PTP4A1Q93096 RNU6-644P-201ENST00000391155 98 ntBASIC-1.29□□□□□ -2.62
PTP4A1Q93096 SNORD42B-201ENST00000458893 67 ntBASIC-1.29□□□□□ -2.62
PTP4A1Q93096 RNU6-274P-201ENST00000459566 107 ntBASIC-1.29□□□□□ -2.62
PTP4A1Q93096 MIR6854-201ENST00000614935 69 ntBASIC-1.29□□□□□ -2.62
PTP4A1Q93096 SNORA63.6-201ENST00000364921 119 ntBASIC-1.3□□□□□ -2.62
PTP4A1Q93096 RNU6-476P-201ENST00000384726 107 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 2059.8 ms