Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SNORD116-15-201ENST00000384445 92 ntBASIC-0.54□□□□□ -2.5
CCDC197Q8NCU1 RNU6-813P-201ENST00000384691 107 ntBASIC-0.54□□□□□ -2.5
CCDC197Q8NCU1 SNORD116-19-201ENST00000384729 92 ntBASIC-0.54□□□□□ -2.5
CCDC197Q8NCU1 RNU6-644P-201ENST00000391155 98 ntBASIC-0.54□□□□□ -2.5
CCDC197Q8NCU1 AC103810.7-201ENST00000607821 91 ntBASIC-0.54□□□□□ -2.5
CCDC197Q8NCU1 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.55□□□□□ -2.5
CCDC197Q8NCU1 SNORD14C-201ENST00000365382 88 ntBASIC-0.55□□□□□ -2.5
CCDC197Q8NCU1 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.55□□□□□ -2.5
CCDC197Q8NCU1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.55□□□□□ -2.5
CCDC197Q8NCU1 SNORA49-201ENST00000386157 136 ntBASIC-0.55□□□□□ -2.5
CCDC197Q8NCU1 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.56□□□□□ -2.5
CCDC197Q8NCU1 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.56□□□□□ -2.5
CCDC197Q8NCU1 MIR9-2-201ENST00000384838 87 ntBASIC-0.56□□□□□ -2.5
CCDC197Q8NCU1 MIR3668-201ENST00000582138 75 ntBASIC-0.56□□□□□ -2.5
CCDC197Q8NCU1 MIR3133-201ENST00000583157 78 ntBASIC-0.56□□□□□ -2.5
CCDC197Q8NCU1 RNU6-132P-201ENST00000383863 107 ntBASIC-0.57□□□□□ -2.5
CCDC197Q8NCU1 AC145423.2-201ENST00000610631 239 ntBASIC-0.57□□□□□ -2.5
CCDC197Q8NCU1 RNU6-704P-201ENST00000364162 103 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 AP000676.1-201ENST00000533307 52 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 MIR4645-201ENST00000583158 77 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 MIR4777-201ENST00000583710 86 ntBASIC-0.58□□□□□ -2.5
CCDC197Q8NCU1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 MIR548E-201ENST00000408287 88 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 SNORD42B-201ENST00000458893 67 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 SNORD4B-201ENST00000459083 72 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 SNORD126-201ENST00000459475 77 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 MIR548Z-201ENST00000584743 97 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 AC012531.4-201ENST00000616509 177 ntBASIC-0.59□□□□□ -2.5
CCDC197Q8NCU1 RNA5SP257-201ENST00000363023 116 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 SNORD114-28-201ENST00000363610 72 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNA5SP275-201ENST00000363936 118 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 SNORD114-4-201ENST00000363962 75 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 MIR582-201ENST00000365731 98 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 MIR548U-201ENST00000390728 81 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 FGF7P7-201ENST00000514120 227 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNU6-795P-201ENST00000516323 103 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNA5SP285-201ENST00000516619 119 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 MIR3064-201ENST00000581130 66 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 MIR6779-201ENST00000617283 64 ntBASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC197Q8NCU1 SNORD115-25-201ENST00000362619 82 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 RNU6-746P-201ENST00000384112 109 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 SNORD116-21-201ENST00000384507 92 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 SNORD2-201ENST00000459163 69 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 RNU6-412P-201ENST00000516434 106 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 AC104996.3-201ENST00000590718 94 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 MIR8064-201ENST00000612863 90 ntBASIC-0.61□□□□□ -2.51
CCDC197Q8NCU1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.62□□□□□ -2.51
CCDC197Q8NCU1 SNORA63.2-201ENST00000362603 126 ntBASIC-0.62□□□□□ -2.51
CCDC197Q8NCU1 RNU6-774P-201ENST00000363238 107 ntBASIC-0.62□□□□□ -2.51
CCDC197Q8NCU1 AC096531.1-201ENST00000419107 107 ntBASIC-0.62□□□□□ -2.51
CCDC197Q8NCU1 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.62□□□□□ -2.51
CCDC197Q8NCU1 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.64□□□□□ -2.51
CCDC197Q8NCU1 RNU6-519P-201ENST00000410590 108 ntBASIC-0.64□□□□□ -2.51
CCDC197Q8NCU1 SNORA19.1-201ENST00000410656 129 ntBASIC-0.64□□□□□ -2.51
CCDC197Q8NCU1 RNU6-904P-201ENST00000516206 101 ntBASIC-0.64□□□□□ -2.51
CCDC197Q8NCU1 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
CCDC197Q8NCU1 SNORA24B-201ENST00000384176 131 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 MIR196A2-201ENST00000385189 110 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 RNU7-55P-201ENST00000459426 62 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 AC097510.1-201ENST00000510945 133 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 MIR3140-201ENST00000583685 90 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
CCDC197Q8NCU1 SNORD56B-201ENST00000384713 71 ntBASIC-0.66□□□□□ -2.52
CCDC197Q8NCU1 SCARNA23-201ENST00000516060 130 ntBASIC-0.66□□□□□ -2.52
CCDC197Q8NCU1 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.66□□□□□ -2.52
CCDC197Q8NCU1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.66□□□□□ -2.52
CCDC197Q8NCU1 RNU6-495P-201ENST00000362995 107 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 RNU6-959P-201ENST00000384671 107 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 RNA5SP292-201ENST00000390974 118 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 RNU6-284P-201ENST00000411105 106 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 snoU13.13-201ENST00000458842 104 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 RNU6-62P-201ENST00000516526 102 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 MIR7111-201ENST00000619751 72 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 MIR6759-201ENST00000638110 65 ntBASIC-0.67□□□□□ -2.52
CCDC197Q8NCU1 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.68□□□□□ -2.52
CCDC197Q8NCU1 RNU6-972P-201ENST00000391208 107 ntBASIC-0.68□□□□□ -2.52
CCDC197Q8NCU1 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 SNORD58A-201ENST00000383875 65 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 MT-TR-201ENST00000387439 65 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 RNU6-887P-201ENST00000410660 100 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 AC114755.3-201ENST00000481111 251 ntBASIC-0.69□□□□□ -2.52
CCDC197Q8NCU1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms