Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNU6-1057P-201ENST00000517162 102 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
VRK3Q8IV63 SNORD114-22-201ENST00000365423 72 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 RNU6-42P-201ENST00000384165 107 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 RNU6-634P-201ENST00000459134 106 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 MIR6734-201ENST00000621166 68 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 AC067863.3-201ENST00000624172 122 ntBASIC1□□□□□ -2.25
VRK3Q8IV63 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 Y_RNA.258-201ENST00000364613 105 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 MIR519E-201ENST00000385075 84 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 RNU6-871P-201ENST00000516122 100 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 RNU6-539P-201ENST00000516665 103 ntBASIC0.99□□□□□ -2.25
VRK3Q8IV63 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
VRK3Q8IV63 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
VRK3Q8IV63 SNORA8.1-201ENST00000384250 140 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 AC093423.1-201ENST00000440817 142 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 RNU7-24P-201ENST00000458867 62 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 RNU7-104P-201ENST00000459398 79 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 RNA5SP220-201ENST00000516298 104 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 RNA5SP404-201ENST00000517118 132 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 MIR548O2-201ENST00000616090 70 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 AC244669.1-204ENST00000621564 178 ntBASIC0.98□□□□□ -2.25
VRK3Q8IV63 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 RNU6-590P-201ENST00000365039 107 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 RNU6-382P-201ENST00000365181 106 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 RNU6-1241P-201ENST00000384536 107 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
VRK3Q8IV63 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
VRK3Q8IV63 RNA5SP47-201ENST00000517230 109 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 AC025627.3-201ENST00000582078 182 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 MIR3675-201ENST00000583661 73 ntBASIC0.97□□□□□ -2.25
VRK3Q8IV63 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 RNU6-495P-201ENST00000362995 107 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 RNU6-726P-201ENST00000364680 107 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 SNORD114-24-201ENST00000365029 72 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 RNU6-540P-201ENST00000384622 101 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 MIR3612-201ENST00000579753 87 ntBASIC0.96□□□□□ -2.26
VRK3Q8IV63 SNORD75.2-201ENST00000408784 58 ntBASIC0.95□□□□□ -2.26
VRK3Q8IV63 RNU7-74P-201ENST00000459104 62 ntBASIC0.95□□□□□ -2.26
VRK3Q8IV63 RNU6-752P-201ENST00000516376 102 ntBASIC0.95□□□□□ -2.26
VRK3Q8IV63 MIR3678-201ENST00000578455 94 ntBASIC0.95□□□□□ -2.26
VRK3Q8IV63 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
VRK3Q8IV63 RNU6-469P-201ENST00000516253 101 ntBASIC0.94□□□□□ -2.26
VRK3Q8IV63 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.94□□□□□ -2.26
VRK3Q8IV63 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.94□□□□□ -2.26
VRK3Q8IV63 MIR6828-201ENST00000636181 60 ntBASIC0.94□□□□□ -2.26
VRK3Q8IV63 SNORD115-31-201ENST00000365318 82 ntBASIC0.93□□□□□ -2.26
VRK3Q8IV63 SCARNA16.5-201ENST00000517114 183 ntBASIC0.93□□□□□ -2.26
VRK3Q8IV63 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
VRK3Q8IV63 MIR4773-1-201ENST00000637203 78 ntBASIC0.93□□□□□ -2.26
VRK3Q8IV63 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VRK3Q8IV63 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VRK3Q8IV63 SNORD115-22-201ENST00000364456 82 ntBASIC0.91□□□□□ -2.26
VRK3Q8IV63 MIR520E-201ENST00000384867 87 ntBASIC0.91□□□□□ -2.26
VRK3Q8IV63 MIR154-201ENST00000385243 84 ntBASIC0.91□□□□□ -2.26
VRK3Q8IV63 RNU6-274P-201ENST00000459566 107 ntBASIC0.91□□□□□ -2.26
VRK3Q8IV63 RPS29P1-201ENST00000465274 159 ntBASIC0.91□□□□□ -2.26
VRK3Q8IV63 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
VRK3Q8IV63 RNU1-93P-201ENST00000364704 169 ntBASIC0.9□□□□□ -2.27
VRK3Q8IV63 Y_RNA.386-201ENST00000383913 105 ntBASIC0.9□□□□□ -2.27
VRK3Q8IV63 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.27
VRK3Q8IV63 AC244098.3-201ENST00000424803 96 ntBASIC0.9□□□□□ -2.27
VRK3Q8IV63 MIR18A-201ENST00000362310 71 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 SNORD45.1-201ENST00000363181 77 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 RNU1-141P-201ENST00000364623 158 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 RNU6-1039P-201ENST00000383931 107 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 SNORA8.2-201ENST00000384372 139 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 RNU6-649P-201ENST00000384463 107 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.89□□□□□ -2.27
VRK3Q8IV63 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 MIR8053-201ENST00000613344 75 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 AL162376.1-201ENST00000624117 175 ntBASIC0.89□□□□□ -2.27
VRK3Q8IV63 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 RNU4-45P-201ENST00000365469 141 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 RNU6-54P-201ENST00000365563 107 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 SNORD99-201ENST00000408612 74 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 NAMPTP3-201ENST00000569273 224 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 MIR4698-201ENST00000577795 80 ntBASIC0.88□□□□□ -2.27
VRK3Q8IV63 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
VRK3Q8IV63 SNORA36.1-201ENST00000363424 132 ntBASIC0.87□□□□□ -2.27
VRK3Q8IV63 RNU6V-201ENST00000384105 107 ntBASIC0.87□□□□□ -2.27
VRK3Q8IV63 RNU6-269P-201ENST00000391077 97 ntBASIC0.87□□□□□ -2.27
VRK3Q8IV63 SNORD42B-201ENST00000458893 67 ntBASIC0.87□□□□□ -2.27
VRK3Q8IV63 U6.111-201ENST00000636093 83 ntBASIC0.87□□□□□ -2.27
VRK3Q8IV63 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
VRK3Q8IV63 RNU6-663P-201ENST00000391105 106 ntBASIC0.86□□□□□ -2.27
VRK3Q8IV63 AL691482.2-201ENST00000457453 84 ntBASIC0.86□□□□□ -2.27
VRK3Q8IV63 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
VRK3Q8IV63 MIR4460-201ENST00000577862 86 ntBASIC0.86□□□□□ -2.27
VRK3Q8IV63 MIR6515-201ENST00000619843 57 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms