Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNA5SP147-201ENST00000516493 109 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 AC244669.1-204ENST00000621564 178 ntBASIC1.7□□□□□ -2.14
LYSMD3Q7Z3D4 SNORA7.1-201ENST00000363750 139 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-990P-201ENST00000364385 104 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 SNORD28-201ENST00000384706 75 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 MT-TY-201ENST00000387409 66 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 RNA5SP299-201ENST00000391203 116 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-656P-201ENST00000516785 107 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 MIR4639-201ENST00000584938 69 ntBASIC1.69□□□□□ -2.14
LYSMD3Q7Z3D4 MIR378A-201ENST00000362177 66 ntBASIC1.68□□□□□ -2.14
LYSMD3Q7Z3D4 SNORD12-201ENST00000391002 90 ntBASIC1.68□□□□□ -2.14
LYSMD3Q7Z3D4 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-135P-201ENST00000516769 101 ntBASIC1.68□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-940P-201ENST00000363433 104 ntBASIC1.67□□□□□ -2.14
LYSMD3Q7Z3D4 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
LYSMD3Q7Z3D4 AC002429.1-201ENST00000437672 148 ntBASIC1.67□□□□□ -2.14
LYSMD3Q7Z3D4 snoU13.31-201ENST00000607291 104 ntBASIC1.67□□□□□ -2.14
LYSMD3Q7Z3D4 RNA5SP215-201ENST00000363440 122 ntBASIC1.66□□□□□ -2.14
LYSMD3Q7Z3D4 MIR548L-201ENST00000408303 86 ntBASIC1.66□□□□□ -2.14
LYSMD3Q7Z3D4 RNU6-469P-201ENST00000516253 101 ntBASIC1.66□□□□□ -2.14
LYSMD3Q7Z3D4 MIR4460-201ENST00000577862 86 ntBASIC1.66□□□□□ -2.14
LYSMD3Q7Z3D4 MIR6739-201ENST00000622461 75 ntBASIC1.66□□□□□ -2.14
LYSMD3Q7Z3D4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.65□□□□□ -2.15
LYSMD3Q7Z3D4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.65□□□□□ -2.15
LYSMD3Q7Z3D4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-1335P-201ENST00000365426 107 ntBASIC1.64□□□□□ -2.15
LYSMD3Q7Z3D4 MIR222-201ENST00000384992 110 ntBASIC1.64□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-1089P-201ENST00000516473 104 ntBASIC1.64□□□□□ -2.15
LYSMD3Q7Z3D4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-726P-201ENST00000364680 107 ntBASIC1.63□□□□□ -2.15
LYSMD3Q7Z3D4 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
LYSMD3Q7Z3D4 RNA5SP247-201ENST00000411181 105 ntBASIC1.63□□□□□ -2.15
LYSMD3Q7Z3D4 SNORD18A-201ENST00000363753 72 ntBASIC1.62□□□□□ -2.15
LYSMD3Q7Z3D4 RNU1-141P-201ENST00000364623 158 ntBASIC1.62□□□□□ -2.15
LYSMD3Q7Z3D4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LYSMD3Q7Z3D4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
LYSMD3Q7Z3D4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LYSMD3Q7Z3D4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-446P-201ENST00000362827 106 ntBASIC1.61□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.61□□□□□ -2.15
LYSMD3Q7Z3D4 RNA5SP47-201ENST00000517230 109 ntBASIC1.61□□□□□ -2.15
LYSMD3Q7Z3D4 AC018659.1-201ENST00000551083 169 ntBASIC1.61□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-716P-201ENST00000365621 103 ntBASIC1.6□□□□□ -2.15
LYSMD3Q7Z3D4 SNORD105-201ENST00000386910 85 ntBASIC1.6□□□□□ -2.15
LYSMD3Q7Z3D4 AP1B1P2-201ENST00000416196 106 ntBASIC1.6□□□□□ -2.15
LYSMD3Q7Z3D4 RNU5B-6P-201ENST00000516765 68 ntBASIC1.6□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-269P-201ENST00000391077 97 ntBASIC1.59□□□□□ -2.15
LYSMD3Q7Z3D4 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
LYSMD3Q7Z3D4 RNU6-122P-201ENST00000516818 107 ntBASIC1.59□□□□□ -2.15
LYSMD3Q7Z3D4 MIR548V-201ENST00000584165 80 ntBASIC1.59□□□□□ -2.15
LYSMD3Q7Z3D4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LYSMD3Q7Z3D4 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6-92P-201ENST00000605893 104 ntBASIC1.58□□□□□ -2.16
LYSMD3Q7Z3D4 SNORD114-4-201ENST00000363962 75 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 Y_RNA.250-201ENST00000364542 110 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6-302P-201ENST00000365249 107 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 SNORA75.1-201ENST00000391130 148 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 AL157398.1-201ENST00000452981 186 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 snoU13.13-201ENST00000458842 104 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 MIR3678-201ENST00000578455 94 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 MIR3938-201ENST00000582157 103 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
LYSMD3Q7Z3D4 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 SNORA8.2-201ENST00000384372 139 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6-1162P-201ENST00000384443 104 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6-321P-201ENST00000410912 106 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 U7.7-201ENST00000459276 60 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 MIR4303-201ENST00000581299 66 ntBASIC1.56□□□□□ -2.16
LYSMD3Q7Z3D4 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 MIR548C-201ENST00000384815 97 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 MIR521-2-201ENST00000384818 87 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 FABP5P4-201ENST00000437203 171 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 RNA5SP484-201ENST00000458857 111 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 TRMT112P2-201ENST00000512910 132 ntBASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.55□□□□□ -2.16
LYSMD3Q7Z3D4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.54□□□□□ -2.16
LYSMD3Q7Z3D4 MIR7978-201ENST00000636158 59 ntBASIC1.54□□□□□ -2.16
LYSMD3Q7Z3D4 SNORD60.1-201ENST00000362451 73 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 MIR630-201ENST00000384957 97 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 MIR573-201ENST00000384964 99 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 MIR3612-201ENST00000579753 87 ntBASIC1.53□□□□□ -2.16
LYSMD3Q7Z3D4 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
LYSMD3Q7Z3D4 RNU7-95P-201ENST00000459222 64 ntBASIC1.52□□□□□ -2.17
LYSMD3Q7Z3D4 RNU1-42P-201ENST00000364033 160 ntBASIC1.51□□□□□ -2.17
LYSMD3Q7Z3D4 SNORD113-4-201ENST00000364802 75 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms