Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
CX3CL1P78423 MIR5190-201ENST00000581537 80 ntBASIC-0.09□□□□□ -2.42
CX3CL1P78423 MIR548AE1-201ENST00000583292 70 ntBASIC-0.09□□□□□ -2.42
CX3CL1P78423 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.09□□□□□ -2.42
CX3CL1P78423 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 MIR451A-201ENST00000385059 72 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 uc_338.10-201ENST00000621872 182 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 MIR6514-201ENST00000622549 70 ntBASIC-0.1□□□□□ -2.43
CX3CL1P78423 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.11□□□□□ -2.43
CX3CL1P78423 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
CX3CL1P78423 RNU7-188P-201ENST00000517063 64 ntBASIC-0.11□□□□□ -2.43
CX3CL1P78423 RNA5SP330-201ENST00000517096 96 ntBASIC-0.11□□□□□ -2.43
CX3CL1P78423 MIR548O2-201ENST00000616090 70 ntBASIC-0.11□□□□□ -2.43
CX3CL1P78423 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 RNU6-972P-201ENST00000391208 107 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 RNU6-887P-201ENST00000410660 100 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 RNA5SP480-201ENST00000516840 109 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.12□□□□□ -2.43
CX3CL1P78423 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 RNU6-132P-201ENST00000383863 107 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 SNORD4B-201ENST00000459083 72 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 CR383656.4-201ENST00000546909 122 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 RN7SL660P-201ENST00000614852 299 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.13□□□□□ -2.43
CX3CL1P78423 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 RNU6-154P-201ENST00000384306 106 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 RNU6-519P-201ENST00000410590 108 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 AL606753.1-201ENST00000427435 87 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 MIR3064-201ENST00000581130 66 ntBASIC-0.14□□□□□ -2.43
CX3CL1P78423 MIR148A-201ENST00000362215 68 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 SNORD58A-201ENST00000383875 65 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 MIR548U-201ENST00000390728 81 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU4-61P-201ENST00000411243 107 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU7-61P-201ENST00000515897 61 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU6-109P-201ENST00000516364 107 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU6-184P-201ENST00000516514 107 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU6-789P-201ENST00000517105 102 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.15□□□□□ -2.43
CX3CL1P78423 RNU6-766P-201ENST00000362478 107 ntBASIC-0.16□□□□□ -2.44
CX3CL1P78423 SNORD114-29-201ENST00000364819 70 ntBASIC-0.16□□□□□ -2.44
CX3CL1P78423 RNU6-302P-201ENST00000365249 107 ntBASIC-0.16□□□□□ -2.44
CX3CL1P78423 U3.27-201ENST00000391237 200 ntBASIC-0.16□□□□□ -2.44
CX3CL1P78423 AC104996.3-201ENST00000590718 94 ntBASIC-0.16□□□□□ -2.44
CX3CL1P78423 SNORA32.1-201ENST00000364514 115 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 RNU6-54P-201ENST00000365563 107 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 RNU6-811P-201ENST00000384069 107 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 MIR106A-201ENST00000384870 81 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 AC104692.1-201ENST00000472406 90 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 FGF7P7-201ENST00000514120 227 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 RNU6-406P-201ENST00000516470 107 ntBASIC-0.17□□□□□ -2.44
CX3CL1P78423 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.18□□□□□ -2.44
CX3CL1P78423 SNORD116-10-201ENST00000363791 102 ntBASIC-0.18□□□□□ -2.44
CX3CL1P78423 MIR2909-201ENST00000617113 69 ntBASIC-0.18□□□□□ -2.44
CX3CL1P78423 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.18□□□□□ -2.44
CX3CL1P78423 MIR652-201ENST00000385278 98 ntBASIC-0.19□□□□□ -2.44
CX3CL1P78423 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.19□□□□□ -2.44
CX3CL1P78423 RNU6-175P-201ENST00000516896 107 ntBASIC-0.19□□□□□ -2.44
CX3CL1P78423 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 RNU6-46P-201ENST00000383860 107 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 RNA5SP292-201ENST00000390974 118 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 RNY4P18-201ENST00000391107 89 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 RNU6-719P-201ENST00000516671 104 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 MIR1295B-201ENST00000636144 60 ntBASIC-0.2□□□□□ -2.44
CX3CL1P78423 SNORA63.2-201ENST00000362603 126 ntBASIC-0.21□□□□□ -2.44
CX3CL1P78423 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.21□□□□□ -2.44
CX3CL1P78423 MIR20A-201ENST00000362279 71 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 AL031737.1-201ENST00000450125 223 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 RNU6-762P-201ENST00000517107 102 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 U7.3-201ENST00000616123 62 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 MIR6779-201ENST00000617283 64 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 AL109933.3-201ENST00000619095 188 ntBASIC-0.22□□□□□ -2.44
CX3CL1P78423 MIR450A1-201ENST00000362262 91 ntBASIC-0.23□□□□□ -2.45
CX3CL1P78423 RNU6-162P-201ENST00000516228 103 ntBASIC-0.23□□□□□ -2.45
CX3CL1P78423 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.23□□□□□ -2.45
CX3CL1P78423 MIR3140-201ENST00000583685 90 ntBASIC-0.23□□□□□ -2.45
CX3CL1P78423 RNA5SP98-201ENST00000363158 137 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 RNU4-32P-201ENST00000363404 141 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 AC244090.1-201ENST00000441884 93 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 RNU6-158P-201ENST00000517104 100 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 AC026421.1-201ENST00000519101 163 ntBASIC-0.24□□□□□ -2.45
CX3CL1P78423 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.25□□□□□ -2.45
CX3CL1P78423 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.25□□□□□ -2.45
CX3CL1P78423 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms