Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.37□□□□□ -2.47
CDH13P55290 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
CDH13P55290 RNU6-774P-201ENST00000363238 107 ntBASIC-0.38□□□□□ -2.47
CDH13P55290 SNORD49B-201ENST00000365172 72 ntBASIC-0.38□□□□□ -2.47
CDH13P55290 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.38□□□□□ -2.47
CDH13P55290 RNA5SP98-201ENST00000363158 137 ntBASIC-0.39□□□□□ -2.47
CDH13P55290 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.39□□□□□ -2.47
CDH13P55290 SNORD116-21-201ENST00000384507 92 ntBASIC-0.39□□□□□ -2.47
CDH13P55290 RNU6-959P-201ENST00000384671 107 ntBASIC-0.39□□□□□ -2.47
CDH13P55290 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.39□□□□□ -2.47
CDH13P55290 MIR451A-201ENST00000385059 72 ntBASIC-0.4□□□□□ -2.47
CDH13P55290 AC244090.1-201ENST00000441884 93 ntBASIC-0.4□□□□□ -2.47
CDH13P55290 RNU6-175P-201ENST00000516896 107 ntBASIC-0.4□□□□□ -2.47
CDH13P55290 MIR6507-201ENST00000613630 70 ntBASIC-0.4□□□□□ -2.47
CDH13P55290 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.41□□□□□ -2.48
CDH13P55290 MT-TR-201ENST00000387439 65 ntBASIC-0.41□□□□□ -2.48
CDH13P55290 AC008267.6-201ENST00000441664 139 ntBASIC-0.41□□□□□ -2.48
CDH13P55290 MIR4263-201ENST00000584745 83 ntBASIC-0.41□□□□□ -2.48
CDH13P55290 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 RNU6-81P-201ENST00000365608 104 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 MIR652-201ENST00000385278 98 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 AC244250.2-201ENST00000418731 148 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 RNU7-85P-201ENST00000458851 63 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 MIR4645-201ENST00000583158 77 ntBASIC-0.42□□□□□ -2.48
CDH13P55290 RNU6-811P-201ENST00000384069 107 ntBASIC-0.43□□□□□ -2.48
CDH13P55290 MIR5589-201ENST00000579442 60 ntBASIC-0.43□□□□□ -2.48
CDH13P55290 MIR4777-201ENST00000583710 86 ntBASIC-0.43□□□□□ -2.48
CDH13P55290 AC103810.7-201ENST00000607821 91 ntBASIC-0.43□□□□□ -2.48
CDH13P55290 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.43□□□□□ -2.48
CDH13P55290 MIR655-201ENST00000362159 97 ntBASIC-0.44□□□□□ -2.48
CDH13P55290 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.44□□□□□ -2.48
CDH13P55290 MIR548U-201ENST00000390728 81 ntBASIC-0.44□□□□□ -2.48
CDH13P55290 RNA5SP300-201ENST00000391197 107 ntBASIC-0.44□□□□□ -2.48
CDH13P55290 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.44□□□□□ -2.48
CDH13P55290 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.44□□□□□ -2.48
CDH13P55290 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.44□□□□□ -2.48
CDH13P55290 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.45□□□□□ -2.48
CDH13P55290 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.45□□□□□ -2.48
CDH13P55290 SNORD114-28-201ENST00000363610 72 ntBASIC-0.45□□□□□ -2.48
CDH13P55290 SNORD114-4-201ENST00000363962 75 ntBASIC-0.45□□□□□ -2.48
CDH13P55290 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.45□□□□□ -2.48
CDH13P55290 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 RNA5SP205-201ENST00000364653 136 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 SNORD2-201ENST00000459163 69 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 SCARNA23-201ENST00000516060 130 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 RNU6-904P-201ENST00000516206 101 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 RNU6-320P-201ENST00000516511 106 ntBASIC-0.46□□□□□ -2.48
CDH13P55290 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.47□□□□□ -2.48
CDH13P55290 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.47□□□□□ -2.48
CDH13P55290 MIR548M-201ENST00000408260 86 ntBASIC-0.47□□□□□ -2.48
CDH13P55290 MIR4802-201ENST00000581881 80 ntBASIC-0.47□□□□□ -2.48
CDH13P55290 RNU6-972P-201ENST00000391208 107 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 SNORD4B-201ENST00000459083 72 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 RNU6-795P-201ENST00000516323 103 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 AP001180.6-201ENST00000584918 159 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 AC012531.4-201ENST00000616509 177 ntBASIC-0.48□□□□□ -2.49
CDH13P55290 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.49□□□□□ -2.49
CDH13P55290 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.49□□□□□ -2.49
CDH13P55290 MIR3064-201ENST00000581130 66 ntBASIC-0.49□□□□□ -2.49
CDH13P55290 MIR8064-201ENST00000612863 90 ntBASIC-0.49□□□□□ -2.49
CDH13P55290 RNU6-54P-201ENST00000365563 107 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 RNU6-132P-201ENST00000383863 107 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 RNU6-476P-201ENST00000384726 107 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 MIR1302-5-201ENST00000408164 150 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 RNU6-519P-201ENST00000410590 108 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 MIR4636-201ENST00000582271 80 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 MIR548Z-201ENST00000584743 97 ntBASIC-0.5□□□□□ -2.49
CDH13P55290 SNORA63.2-201ENST00000362603 126 ntBASIC-0.51□□□□□ -2.49
CDH13P55290 RNA5SP275-201ENST00000363936 118 ntBASIC-0.51□□□□□ -2.49
CDH13P55290 AC104996.3-201ENST00000590718 94 ntBASIC-0.51□□□□□ -2.49
CDH13P55290 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.51□□□□□ -2.49
CDH13P55290 RNU6-834P-201ENST00000362367 110 ntBASIC-0.52□□□□□ -2.49
CDH13P55290 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.52□□□□□ -2.49
CDH13P55290 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.52□□□□□ -2.49
CDH13P55290 FGF7P7-201ENST00000514120 227 ntBASIC-0.52□□□□□ -2.49
CDH13P55290 MIR4788-201ENST00000639104 80 ntBASIC-0.52□□□□□ -2.49
CDH13P55290 SNORD58A-201ENST00000383875 65 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 RNU6-455P-201ENST00000384681 107 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 RNU6-887P-201ENST00000410660 100 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 RNU6-62P-201ENST00000516526 102 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 AL590491.3-201ENST00000610731 82 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 AL365222.1-201ENST00000614661 98 ntBASIC-0.53□□□□□ -2.49
CDH13P55290 SNORD14C-201ENST00000365382 88 ntBASIC-0.54□□□□□ -2.5
CDH13P55290 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.54□□□□□ -2.5
CDH13P55290 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.54□□□□□ -2.5
CDH13P55290 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.54□□□□□ -2.5
CDH13P55290 AC096531.1-201ENST00000419107 107 ntBASIC-0.54□□□□□ -2.5
CDH13P55290 RNY4P3-201ENST00000365254 95 ntBASIC-0.55□□□□□ -2.5
CDH13P55290 SNORA19.1-201ENST00000410656 129 ntBASIC-0.55□□□□□ -2.5
CDH13P55290 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.55□□□□□ -2.5
CDH13P55290 RNU6-719P-201ENST00000516671 104 ntBASIC-0.55□□□□□ -2.5
CDH13P55290 RNU6-900P-201ENST00000384498 102 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 RNU6-537P-201ENST00000517277 103 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 MIR4493-201ENST00000584016 73 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.56□□□□□ -2.5
CDH13P55290 MIR101-1-201ENST00000362265 75 ntBASIC-0.57□□□□□ -2.5
CDH13P55290 SNORD115-25-201ENST00000362619 82 ntBASIC-0.57□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 197.6 ms