Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-647P-201ENST00000364243 107 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 SNORA63.6-201ENST00000364921 119 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 RNU6-806P-201ENST00000365147 105 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 MT-TL1-201ENST00000386347 75 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 SNORA19.1-201ENST00000410656 129 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 AC113618.1-201ENST00000416747 285 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 RNU6-643P-201ENST00000384018 107 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 MIR548F1-201ENST00000408667 84 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 AC138393.2-201ENST00000414742 246 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 RNU6-277P-201ENST00000516272 106 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 RNY3P15-201ENST00000516297 97 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 SNORA40.15-201ENST00000516884 107 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 AL365265.1-201ENST00000621045 234 ntBASIC-1.96□□□□□ -2.72
NUP98P52948 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 RPL35AP4-201ENST00000412007 102 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.97□□□□□ -2.72
NUP98P52948 RNY4P20-201ENST00000516678 93 ntBASIC-1.97□□□□□ -2.72
NUP98P52948 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.97□□□□□ -2.72
NUP98P52948 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 Y_RNA.318-201ENST00000365131 97 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 RNU4-88P-201ENST00000411220 86 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.98□□□□□ -2.73
NUP98P52948 RNU7-24P-201ENST00000458867 62 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.98□□□□□ -2.73
NUP98P52948 MTND3P22-201ENST00000510932 243 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 RNU6-75P-201ENST00000515944 104 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 MIR4282-201ENST00000583613 67 ntBASIC-1.98□□□□□ -2.73
NUP98P52948 RNU6-309P-201ENST00000364573 106 ntBASIC-1.99□□□□□ -2.73
NUP98P52948 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.99□□□□□ -2.73
NUP98P52948 AC080013.6-201ENST00000606185 215 ntBASIC-1.99□□□□□ -2.73
NUP98P52948 SNORD38.1-201ENST00000363863 68 ntBASIC-2□□□□□ -2.73
NUP98P52948 Y_RNA.521-201ENST00000384560 114 ntBASIC-2□□□□□ -2.73
NUP98P52948 MIR548G-201ENST00000408442 89 ntBASIC-2□□□□□ -2.73
NUP98P52948 MIR1252-201ENST00000408861 65 ntBASIC-2□□□□□ -2.73
NUP98P52948 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 MIR519A2-201ENST00000384990 87 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 MTATP6P21-201ENST00000440681 189 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 RNU7-88P-201ENST00000458752 63 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 Y_RNA.443-201ENST00000384135 111 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 MIR759-201ENST00000390224 91 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 RNU7-154P-201ENST00000516194 62 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 RNU6-1121P-201ENST00000516802 109 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 RNU7-6P-201ENST00000516845 62 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.01□□□□□ -2.73
NUP98P52948 MIRLET7F1-201ENST00000362202 87 ntBASIC-2.02□□□□□ -2.73
NUP98P52948 SNORD116-2-201ENST00000384274 95 ntBASIC-2.02□□□□□ -2.73
NUP98P52948 MIR3123-201ENST00000583417 75 ntBASIC-2.02□□□□□ -2.73
NUP98P52948 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.02□□□□□ -2.73
NUP98P52948 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 RNU6-768P-201ENST00000384683 107 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 AL035461.1-201ENST00000421490 332 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 AP000770.2-201ENST00000623694 100 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 RNU6-65P-201ENST00000516332 98 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 MIR6844-201ENST00000637122 62 ntBASIC-2.03□□□□□ -2.73
NUP98P52948 RNU6-1079P-201ENST00000362861 110 ntBASIC-2.04□□□□□ -2.74
NUP98P52948 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.04□□□□□ -2.74
NUP98P52948 AL132765.2-201ENST00000610812 351 ntBASIC-2.04□□□□□ -2.74
NUP98P52948 Y_RNA.505-201ENST00000384489 102 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 MIR23C-201ENST00000579846 100 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 AL442128.1-201ENST00000615151 90 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 MIR1255B1-201ENST00000636325 63 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 AC120024.2-201ENST00000576526 175 ntBASIC-2.05□□□□□ -2.74
NUP98P52948 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.06□□□□□ -2.74
NUP98P52948 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.06□□□□□ -2.74
NUP98P52948 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.06□□□□□ -2.74
NUP98P52948 MIR548Q-201ENST00000408404 100 ntBASIC-2.06□□□□□ -2.74
NUP98P52948 RNU6-508P-201ENST00000363231 103 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 MIR4748-201ENST00000578076 82 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 RNU6-363P-201ENST00000362895 105 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 RNU6-260P-201ENST00000384092 107 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 MTND5P22-201ENST00000458380 195 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 MIR466-201ENST00000580653 84 ntBASIC-2.07□□□□□ -2.74
NUP98P52948 SNORA63.2-201ENST00000362603 126 ntBASIC-2.08□□□□□ -2.74
NUP98P52948 Y_RNA.292-201ENST00000364904 97 ntBASIC-2.08□□□□□ -2.74
NUP98P52948 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.08□□□□□ -2.74
NUP98P52948 MT-TI-201ENST00000387365 69 ntBASIC-2.08□□□□□ -2.74
NUP98P52948 MIR3163-201ENST00000581592 73 ntBASIC-2.08□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 240.5 ms