Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 RNU6-959P-201ENST00000384671 107 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 AC244250.2-201ENST00000418731 148 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 AC008267.6-201ENST00000441664 139 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 AC244090.1-201ENST00000441884 93 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 RNU7-85P-201ENST00000458851 63 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
CCR9P51686 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.47□□□□□ -2.48
CCR9P51686 MIR652-201ENST00000385278 98 ntBASIC-0.47□□□□□ -2.48
CCR9P51686 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.47□□□□□ -2.48
CCR9P51686 RNU6-811P-201ENST00000384069 107 ntBASIC-0.48□□□□□ -2.49
CCR9P51686 MIR548U-201ENST00000390728 81 ntBASIC-0.48□□□□□ -2.49
CCR9P51686 RNA5SP300-201ENST00000391197 107 ntBASIC-0.48□□□□□ -2.49
CCR9P51686 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.48□□□□□ -2.49
CCR9P51686 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.49□□□□□ -2.49
CCR9P51686 RNA5SP275-201ENST00000363936 118 ntBASIC-0.49□□□□□ -2.49
CCR9P51686 AC096531.1-201ENST00000419107 107 ntBASIC-0.49□□□□□ -2.49
CCR9P51686 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.49□□□□□ -2.49
CCR9P51686 RNA5SP457-201ENST00000363657 124 ntBASIC-0.5□□□□□ -2.49
CCR9P51686 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.5□□□□□ -2.49
CCR9P51686 SNORD126-201ENST00000459475 77 ntBASIC-0.5□□□□□ -2.49
CCR9P51686 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.5□□□□□ -2.49
CCR9P51686 MIR4777-201ENST00000583710 86 ntBASIC-0.5□□□□□ -2.49
CCR9P51686 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
CCR9P51686 RNU6-81P-201ENST00000365608 104 ntBASIC-0.51□□□□□ -2.49
CCR9P51686 RNU6-795P-201ENST00000516323 103 ntBASIC-0.51□□□□□ -2.49
CCR9P51686 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 SNORD114-4-201ENST00000363962 75 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 RNA5SP205-201ENST00000364653 136 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 MIR548M-201ENST00000408260 86 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 SCARNA23-201ENST00000516060 130 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 AC012531.4-201ENST00000616509 177 ntBASIC-0.52□□□□□ -2.49
CCR9P51686 MIR655-201ENST00000362159 97 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 MIR329-2-201ENST00000385029 84 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 RNU6-904P-201ENST00000516206 101 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.53□□□□□ -2.49
CCR9P51686 RNU6-54P-201ENST00000365563 107 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 MIR196A2-201ENST00000385189 110 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 RNU6-519P-201ENST00000410590 108 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 FGF7P7-201ENST00000514120 227 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 MIR548Z-201ENST00000584743 97 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 MIR6779-201ENST00000617283 64 ntBASIC-0.54□□□□□ -2.5
CCR9P51686 RNU6-132P-201ENST00000383863 107 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 RNU6-476P-201ENST00000384726 107 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 RNU6-972P-201ENST00000391208 107 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.55□□□□□ -2.5
CCR9P51686 SNORD4B-201ENST00000459083 72 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 SNORD2-201ENST00000459163 69 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 MIR3064-201ENST00000581130 66 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 MIR7111-201ENST00000619751 72 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 MIR4788-201ENST00000639104 80 ntBASIC-0.55□□□□□ -2.5
CCR9P51686 MIR1302-5-201ENST00000408164 150 ntBASIC-0.56□□□□□ -2.5
CCR9P51686 AC104996.3-201ENST00000590718 94 ntBASIC-0.56□□□□□ -2.5
CCR9P51686 RNU6-455P-201ENST00000384681 107 ntBASIC-0.57□□□□□ -2.5
CCR9P51686 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.57□□□□□ -2.5
CCR9P51686 SNORA19.1-201ENST00000410656 129 ntBASIC-0.57□□□□□ -2.5
CCR9P51686 SNORA63.2-201ENST00000362603 126 ntBASIC-0.58□□□□□ -2.5
CCR9P51686 RNU6-762P-201ENST00000517107 102 ntBASIC-0.58□□□□□ -2.5
CCR9P51686 AL365222.1-201ENST00000614661 98 ntBASIC-0.58□□□□□ -2.5
CCR9P51686 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.59□□□□□ -2.5
CCR9P51686 RNU6-887P-201ENST00000410660 100 ntBASIC-0.59□□□□□ -2.5
CCR9P51686 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.59□□□□□ -2.5
CCR9P51686 RNU6-719P-201ENST00000516671 104 ntBASIC-0.59□□□□□ -2.5
CCR9P51686 IGLVI-20-201ENST00000519296 130 ntBASIC-0.59□□□□□ -2.5
CCR9P51686 RNA5SP257-201ENST00000363023 116 ntBASIC-0.6□□□□□ -2.51
CCR9P51686 SNORD114-31-201ENST00000363219 75 ntBASIC-0.6□□□□□ -2.51
CCR9P51686 RNU6-284P-201ENST00000411105 106 ntBASIC-0.6□□□□□ -2.51
CCR9P51686 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCR9P51686 MIR4645-201ENST00000583158 77 ntBASIC-0.6□□□□□ -2.51
CCR9P51686 AL590491.3-201ENST00000610731 82 ntBASIC-0.6□□□□□ -2.51
CCR9P51686 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCR9P51686 SNORD114-11-201ENST00000363738 75 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 SNORD58A-201ENST00000383875 65 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 RNU6-62P-201ENST00000516526 102 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 AP000676.1-201ENST00000533307 52 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.61□□□□□ -2.51
CCR9P51686 RNU6-834P-201ENST00000362367 110 ntBASIC-0.62□□□□□ -2.51
CCR9P51686 SNORD114-28-201ENST00000363610 72 ntBASIC-0.62□□□□□ -2.51
CCR9P51686 MIR8064-201ENST00000612863 90 ntBASIC-0.62□□□□□ -2.51
CCR9P51686 uc_338.36-201ENST00000622331 158 ntBASIC-0.62□□□□□ -2.51
CCR9P51686 SNORD115-25-201ENST00000362619 82 ntBASIC-0.63□□□□□ -2.51
CCR9P51686 RNY4P3-201ENST00000365254 95 ntBASIC-0.63□□□□□ -2.51
CCR9P51686 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.63□□□□□ -2.51
CCR9P51686 MIR4432-201ENST00000581823 84 ntBASIC-0.63□□□□□ -2.51
CCR9P51686 MIR548AZ-201ENST00000616567 95 ntBASIC-0.63□□□□□ -2.51
CCR9P51686 SNORD116-10-201ENST00000363791 102 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 RNU6-900P-201ENST00000384498 102 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 SNORA32.3-201ENST00000384772 121 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 MIR9-2-201ENST00000384838 87 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 SNORA49-201ENST00000386157 136 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 SNORD42B-201ENST00000458893 67 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 RNA5SP285-201ENST00000516619 119 ntBASIC-0.64□□□□□ -2.51
CCR9P51686 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.65□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 171.5 ms