Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MIR1245B-201ENST00000636115 69 ntBASIC0.89□□□□□ -2.27
HOXC12P31275 RNU6-652P-201ENST00000365488 107 ntBASIC0.88□□□□□ -2.27
HOXC12P31275 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
HOXC12P31275 MIR3140-201ENST00000583685 90 ntBASIC0.88□□□□□ -2.27
HOXC12P31275 MIR519E-201ENST00000385075 84 ntBASIC0.87□□□□□ -2.27
HOXC12P31275 MIR4666B-201ENST00000578142 81 ntBASIC0.87□□□□□ -2.27
HOXC12P31275 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
HOXC12P31275 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
HOXC12P31275 Y_RNA.219-201ENST00000364232 113 ntBASIC0.86□□□□□ -2.27
HOXC12P31275 RNU4-38P-201ENST00000364472 129 ntBASIC0.86□□□□□ -2.27
HOXC12P31275 MIR3973-201ENST00000579824 107 ntBASIC0.86□□□□□ -2.27
HOXC12P31275 AC092634.7-201ENST00000621022 103 ntBASIC0.86□□□□□ -2.27
HOXC12P31275 SNORA63.2-201ENST00000362603 126 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 RNU6-624P-201ENST00000363411 107 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 Y_RNA.313-201ENST00000365095 103 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 RNU6-787P-201ENST00000384032 107 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 RNU6-1124P-201ENST00000384169 107 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 RNU6-269P-201ENST00000391077 97 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 MIR3202-2-201ENST00000635980 79 ntBASIC0.85□□□□□ -2.27
HOXC12P31275 Y_RNA.316-201ENST00000365118 111 ntBASIC0.84□□□□□ -2.27
HOXC12P31275 SNORA8.2-201ENST00000384372 139 ntBASIC0.84□□□□□ -2.27
HOXC12P31275 U3.27-201ENST00000391237 200 ntBASIC0.84□□□□□ -2.27
HOXC12P31275 AL450471.1-201ENST00000447509 127 ntBASIC0.84□□□□□ -2.27
HOXC12P31275 MIR7107-201ENST00000611489 80 ntBASIC0.84□□□□□ -2.27
HOXC12P31275 RNU5F-1-201ENST00000362507 117 ntBASIC0.83□□□□□ -2.28
HOXC12P31275 snoU13.17-201ENST00000458802 104 ntBASIC0.83□□□□□ -2.28
HOXC12P31275 Y_RNA.30-201ENST00000362572 97 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 RNU6-161P-201ENST00000363051 106 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 MIR216B-201ENST00000390186 82 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 SNORD78.1-201ENST00000390866 65 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 RNU6-129P-201ENST00000391022 107 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 RNU6-1108P-201ENST00000516308 104 ntBASIC0.82□□□□□ -2.28
HOXC12P31275 SNORD77.2-201ENST00000391045 68 ntBASIC0.81□□□□□ -2.28
HOXC12P31275 AL590095.2-201ENST00000604136 117 ntBASIC0.81□□□□□ -2.28
HOXC12P31275 AL162376.1-201ENST00000624117 175 ntBASIC0.81□□□□□ -2.28
HOXC12P31275 RNU6-228P-201ENST00000362700 106 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 RNA5SP457-201ENST00000363657 124 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 MIR193B-201ENST00000384907 83 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 MIR1255A-201ENST00000408338 113 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 MIR1273G-201ENST00000577677 100 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 SNORA25.18-201ENST00000607153 114 ntBASIC0.8□□□□□ -2.28
HOXC12P31275 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HOXC12P31275 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
HOXC12P31275 RNU6-208P-201ENST00000362431 107 ntBASIC0.79□□□□□ -2.28
HOXC12P31275 SNORA40.8-201ENST00000411034 126 ntBASIC0.79□□□□□ -2.28
HOXC12P31275 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.79□□□□□ -2.28
HOXC12P31275 RNU1-141P-201ENST00000364623 158 ntBASIC0.78□□□□□ -2.28
HOXC12P31275 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.78□□□□□ -2.28
HOXC12P31275 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.78□□□□□ -2.28
HOXC12P31275 MIR4460-201ENST00000577862 86 ntBASIC0.78□□□□□ -2.28
HOXC12P31275 RNU6-478P-201ENST00000363904 110 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 Y_RNA.264-201ENST00000364665 102 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 SNORD71-201ENST00000411292 86 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 AC093423.1-201ENST00000440817 142 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 AC069271.1-201ENST00000445577 156 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 RNA5SP484-201ENST00000458857 111 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 Y_RNA.660-201ENST00000516002 120 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 RNU6-557P-201ENST00000516842 110 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 MIR4714-201ENST00000580728 77 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 MIR6513-201ENST00000621188 64 ntBASIC0.77□□□□□ -2.29
HOXC12P31275 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
HOXC12P31275 NAMPTP3-201ENST00000569273 224 ntBASIC0.76□□□□□ -2.29
HOXC12P31275 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
HOXC12P31275 RNU6-686P-201ENST00000364839 107 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 SNORA24B-201ENST00000384176 131 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 MIR4752-201ENST00000579672 72 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 MIR548O2-201ENST00000616090 70 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 AC073869.9-201ENST00000641610 120 ntBASIC0.75□□□□□ -2.29
HOXC12P31275 Y_RNA.371-201ENST00000365591 113 ntBASIC0.74□□□□□ -2.29
HOXC12P31275 MIR518A1-201ENST00000385068 85 ntBASIC0.74□□□□□ -2.29
HOXC12P31275 RNU6-1177P-201ENST00000391058 104 ntBASIC0.74□□□□□ -2.29
HOXC12P31275 AC097510.1-201ENST00000510945 133 ntBASIC0.74□□□□□ -2.29
HOXC12P31275 RNU4-54P-201ENST00000516428 129 ntBASIC0.74□□□□□ -2.29
HOXC12P31275 RNU6-315P-201ENST00000362666 107 ntBASIC0.73□□□□□ -2.29
HOXC12P31275 Y_RNA.178-201ENST00000363832 102 ntBASIC0.73□□□□□ -2.29
HOXC12P31275 MT-TY-201ENST00000387409 66 ntBASIC0.73□□□□□ -2.29
HOXC12P31275 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
HOXC12P31275 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
HOXC12P31275 RNU6-380P-201ENST00000410207 107 ntBASIC0.73□□□□□ -2.29
HOXC12P31275 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
HOXC12P31275 MIRLET7A1-201ENST00000362295 80 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 Y_RNA.12-201ENST00000362393 112 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 RNU6V-201ENST00000384105 107 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 RNA5SP225-201ENST00000410874 135 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 AC006210.1-201ENST00000424882 111 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 Y_RNA.685-201ENST00000516532 108 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 MIR4712-201ENST00000583750 82 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 AC010487.4-201ENST00000637027 61 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
HOXC12P31275 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
HOXC12P31275 Y_RNA.94-201ENST00000363068 106 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 Y_RNA.115-201ENST00000363272 98 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
HOXC12P31275 SNORD110-201ENST00000408189 75 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms