Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR577-201ENST00000385196 96 ntBASIC-0.62□□□□□ -2.51
BDNFP23560 SNORA49-201ENST00000386157 136 ntBASIC-0.62□□□□□ -2.51
BDNFP23560 MIR4679-2-201ENST00000578358 77 ntBASIC-0.62□□□□□ -2.51
BDNFP23560 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.62□□□□□ -2.51
BDNFP23560 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.62□□□□□ -2.51
BDNFP23560 SNORD114-14-201ENST00000362723 75 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 RNU7-55P-201ENST00000459426 62 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 SNORA40.17-201ENST00000517256 115 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 MIR4536-1-201ENST00000583537 88 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 AC145423.2-201ENST00000610631 239 ntBASIC-0.63□□□□□ -2.51
BDNFP23560 RNU6-54P-201ENST00000365563 107 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 SNORD56B-201ENST00000384713 71 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 SNORD75.1-201ENST00000408373 60 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNU6-65P-201ENST00000516332 98 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNA5SP67-201ENST00000516422 131 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNU6-426P-201ENST00000516464 97 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 MTND5P41-201ENST00000517498 206 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 MIR4280-201ENST00000582178 76 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNU6-86P-201ENST00000606534 107 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 AC025521.1-201ENST00000621624 286 ntBASIC-0.64□□□□□ -2.51
BDNFP23560 RNU6-832P-201ENST00000363319 107 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 SNORD50.2-201ENST00000365465 70 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 RNU6-886P-201ENST00000384319 105 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 MTND4LP9-201ENST00000427694 174 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 AL445193.1-201ENST00000441183 141 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 RNA5SP272-201ENST00000516095 111 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 MIR4439-201ENST00000583746 80 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
BDNFP23560 RNY3P2-201ENST00000362918 102 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 MIR204-201ENST00000385200 110 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 MT-TQ-201ENST00000387372 72 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 RNU6-762P-201ENST00000517107 102 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 AL627230.5-201ENST00000619807 58 ntBASIC-0.66□□□□□ -2.52
BDNFP23560 SNORA3B-201ENST00000391305 131 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 MIR548E-201ENST00000408287 88 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 snoU13.13-201ENST00000458842 104 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 RNU6-772P-201ENST00000516042 105 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 RNA5SP169-201ENST00000517268 117 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 MIR548AX-201ENST00000580117 73 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 MIR6851-201ENST00000617060 67 ntBASIC-0.67□□□□□ -2.52
BDNFP23560 AL157777.2-201ENST00000258070 137 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 MIR582-201ENST00000365731 98 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 SNORA40-201ENST00000388090 126 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 AC021146.6-201ENST00000514659 117 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 AC068339.1-201ENST00000526965 141 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 AL513043.2-201ENST00000573941 143 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 AL035470.1-201ENST00000622571 220 ntBASIC-0.68□□□□□ -2.52
BDNFP23560 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.69□□□□□ -2.52
BDNFP23560 RNU6-973P-201ENST00000364690 107 ntBASIC-0.69□□□□□ -2.52
BDNFP23560 RNU7-85P-201ENST00000458851 63 ntBASIC-0.69□□□□□ -2.52
BDNFP23560 SNORD42B-201ENST00000458893 67 ntBASIC-0.69□□□□□ -2.52
BDNFP23560 SNORD45B-201ENST00000364617 72 ntBASIC-0.7□□□□□ -2.52
BDNFP23560 FGF7P7-201ENST00000514120 227 ntBASIC-0.7□□□□□ -2.52
BDNFP23560 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
BDNFP23560 RNU6-502P-201ENST00000362419 108 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 MIR548U-201ENST00000390728 81 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 RNU6-644P-201ENST00000391155 98 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 SNORD38.3-201ENST00000516599 73 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 RNU6-719P-201ENST00000516671 104 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 MIR3613-201ENST00000579844 87 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 MIR4436A-201ENST00000585278 85 ntBASIC-0.71□□□□□ -2.52
BDNFP23560 MIR409-201ENST00000362237 79 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 SNORA63.2-201ENST00000362603 126 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 RNU6-476P-201ENST00000384726 107 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 RNU6-257P-201ENST00000410238 98 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 MIR5009-201ENST00000578736 100 ntBASIC-0.72□□□□□ -2.52
BDNFP23560 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.73□□□□□ -2.53
BDNFP23560 RNU6-132P-201ENST00000383863 107 ntBASIC-0.73□□□□□ -2.53
BDNFP23560 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.73□□□□□ -2.53
BDNFP23560 RNU6-813P-201ENST00000384691 107 ntBASIC-0.73□□□□□ -2.53
BDNFP23560 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.73□□□□□ -2.53
BDNFP23560 AC097510.1-201ENST00000510945 133 ntBASIC-0.73□□□□□ -2.53
BDNFP23560 RNU6-495P-201ENST00000362995 107 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 MIR518B-201ENST00000385127 83 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.74□□□□□ -2.53
BDNFP23560 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 MIR3064-201ENST00000581130 66 ntBASIC-0.74□□□□□ -2.53
BDNFP23560 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 SNORD4B-201ENST00000459083 72 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 RNU7-107P-201ENST00000459121 61 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 AC103810.7-201ENST00000607821 91 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 MIR3914-2-201ENST00000637339 95 ntBASIC-0.75□□□□□ -2.53
BDNFP23560 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.76□□□□□ -2.53
BDNFP23560 AC104996.3-201ENST00000590718 94 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 427.8 ms