Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR6129-201ENST00000616087 109 ntBASIC-0.08□□□□□ -2.42
CDH3P22223 AC084368.1-201ENST00000620935 65 ntBASIC-0.08□□□□□ -2.42
CDH3P22223 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
CDH3P22223 RNU6-935P-201ENST00000410371 100 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU7-159P-201ENST00000459284 62 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU6-479P-201ENST00000516348 105 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU6-62P-201ENST00000516526 102 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU6-180P-201ENST00000516697 61 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 MIR548AE1-201ENST00000583292 70 ntBASIC-0.09□□□□□ -2.42
CDH3P22223 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.09□□□□□ -2.42
CDH3P22223 SNORD113-1-201ENST00000365321 69 ntBASIC-0.1□□□□□ -2.43
CDH3P22223 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
CDH3P22223 RNU6-35P-201ENST00000384530 107 ntBASIC-0.1□□□□□ -2.43
CDH3P22223 RNU6-644P-201ENST00000391155 98 ntBASIC-0.1□□□□□ -2.43
CDH3P22223 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.1□□□□□ -2.43
CDH3P22223 RNU6-834P-201ENST00000362367 110 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 MIR106A-201ENST00000384870 81 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 SCARNA23-201ENST00000516060 130 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 MIR4536-1-201ENST00000583537 88 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 MIR6759-201ENST00000638110 65 ntBASIC-0.11□□□□□ -2.43
CDH3P22223 RNU6-106P-201ENST00000384405 107 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 RNU6-554P-201ENST00000410466 106 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.12□□□□□ -2.43
CDH3P22223 RNU6-65P-201ENST00000516332 98 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 RNU6-589P-201ENST00000516485 107 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 RNU6-537P-201ENST00000517277 103 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 uc_338.10-201ENST00000621872 182 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 MIR6514-201ENST00000622549 70 ntBASIC-0.12□□□□□ -2.43
CDH3P22223 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 MIR1265-201ENST00000408444 86 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 Z95118.1-201ENST00000421372 247 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 RNU6-313P-201ENST00000516317 112 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 RNU7-188P-201ENST00000517063 64 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 RN7SL660P-201ENST00000614852 299 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 MIR548O2-201ENST00000616090 70 ntBASIC-0.13□□□□□ -2.43
CDH3P22223 SNORD114-31-201ENST00000363219 75 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 MIR590-201ENST00000385008 97 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 MIR451A-201ENST00000385059 72 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 MIR216B-201ENST00000390186 82 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 MIR1302-5-201ENST00000408164 150 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 CR383656.4-201ENST00000546909 122 ntBASIC-0.14□□□□□ -2.43
CDH3P22223 RNU6-132P-201ENST00000383863 107 ntBASIC-0.15□□□□□ -2.43
CDH3P22223 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.15□□□□□ -2.43
CDH3P22223 SNORA19-201ENST00000384737 128 ntBASIC-0.15□□□□□ -2.43
CDH3P22223 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 RNU6-154P-201ENST00000384306 106 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 RNU2-51P-201ENST00000410708 197 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 SNORD4B-201ENST00000459083 72 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 MIR5589-201ENST00000579442 60 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.16□□□□□ -2.44
CDH3P22223 MIR148A-201ENST00000362215 68 ntBASIC-0.17□□□□□ -2.44
CDH3P22223 SNORD58A-201ENST00000383875 65 ntBASIC-0.18□□□□□ -2.44
CDH3P22223 RNU6-972P-201ENST00000391208 107 ntBASIC-0.18□□□□□ -2.44
CDH3P22223 U3.27-201ENST00000391237 200 ntBASIC-0.18□□□□□ -2.44
CDH3P22223 RNU6-887P-201ENST00000410660 100 ntBASIC-0.18□□□□□ -2.44
CDH3P22223 MIR3064-201ENST00000581130 66 ntBASIC-0.18□□□□□ -2.44
CDH3P22223 SNORD114-29-201ENST00000364819 70 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-46P-201ENST00000383860 107 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-519P-201ENST00000410590 108 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 AC104692.1-201ENST00000472406 90 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-109P-201ENST00000516364 107 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-184P-201ENST00000516514 107 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-175P-201ENST00000516896 107 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 MIR6086-201ENST00000638065 55 ntBASIC-0.19□□□□□ -2.44
CDH3P22223 RNU6-54P-201ENST00000365563 107 ntBASIC-0.2□□□□□ -2.44
CDH3P22223 MIR652-201ENST00000385278 98 ntBASIC-0.2□□□□□ -2.44
CDH3P22223 AC104996.3-201ENST00000590718 94 ntBASIC-0.2□□□□□ -2.44
CDH3P22223 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.2□□□□□ -2.44
CDH3P22223 MIR655-201ENST00000362159 97 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 MIR548U-201ENST00000390728 81 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 FGF7P7-201ENST00000514120 227 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 RNU7-61P-201ENST00000515897 61 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 MIR4645-201ENST00000583158 77 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 MIR1295B-201ENST00000636144 60 ntBASIC-0.21□□□□□ -2.44
CDH3P22223 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.22□□□□□ -2.44
CDH3P22223 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 RNU6-811P-201ENST00000384069 107 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 AL606753.1-201ENST00000427435 87 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 RNU6-719P-201ENST00000516671 104 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.22□□□□□ -2.44
CDH3P22223 RNU6-766P-201ENST00000362478 107 ntBASIC-0.23□□□□□ -2.45
CDH3P22223 MIR214-201ENST00000385214 110 ntBASIC-0.23□□□□□ -2.45
CDH3P22223 MIR6507-201ENST00000613630 70 ntBASIC-0.23□□□□□ -2.45
CDH3P22223 MIR20A-201ENST00000362279 71 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms