Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.46□□□□□ -2.48
ERCC2P18074 RNU6-774P-201ENST00000363238 107 ntBASIC-0.46□□□□□ -2.48
ERCC2P18074 RNU7-85P-201ENST00000458851 63 ntBASIC-0.46□□□□□ -2.48
ERCC2P18074 MIR4263-201ENST00000584745 83 ntBASIC-0.46□□□□□ -2.48
ERCC2P18074 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 SNORD116-14-201ENST00000383894 92 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 SNORD116-17-201ENST00000383929 92 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 SNORD116-15-201ENST00000384445 92 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 SNORD116-19-201ENST00000384729 92 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 RNA5SP300-201ENST00000391197 107 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 AC244090.1-201ENST00000441884 93 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 MIR4645-201ENST00000583158 77 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 AC103810.7-201ENST00000607821 91 ntBASIC-0.47□□□□□ -2.48
ERCC2P18074 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.48□□□□□ -2.49
ERCC2P18074 RNU6-813P-201ENST00000384691 107 ntBASIC-0.48□□□□□ -2.49
ERCC2P18074 U3.27-201ENST00000391237 200 ntBASIC-0.48□□□□□ -2.49
ERCC2P18074 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.48□□□□□ -2.49
ERCC2P18074 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.48□□□□□ -2.49
ERCC2P18074 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNU6-704P-201ENST00000364162 103 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNU4-36P-201ENST00000364294 144 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNU6-54P-201ENST00000365563 107 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNU6-762P-201ENST00000517107 102 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 MIR4788-201ENST00000639104 80 ntBASIC-0.49□□□□□ -2.49
ERCC2P18074 RNA5SP275-201ENST00000363936 118 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 RNU6-880P-201ENST00000384526 107 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 RNU6-644P-201ENST00000391155 98 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 FGF7P7-201ENST00000514120 227 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 RNU6-719P-201ENST00000516671 104 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 MIR5589-201ENST00000579442 60 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 MIR4802-201ENST00000581881 80 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 MIR548Z-201ENST00000584743 97 ntBASIC-0.5□□□□□ -2.49
ERCC2P18074 RNU6-132P-201ENST00000383863 107 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 RNU6-746P-201ENST00000384112 109 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 RNU6-455P-201ENST00000384681 107 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 AC096531.1-201ENST00000419107 107 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 RNU6-795P-201ENST00000516323 103 ntBASIC-0.51□□□□□ -2.49
ERCC2P18074 SNORD116-21-201ENST00000384507 92 ntBASIC-0.52□□□□□ -2.49
ERCC2P18074 RNU6-412P-201ENST00000516434 106 ntBASIC-0.52□□□□□ -2.49
ERCC2P18074 MIR4777-201ENST00000583710 86 ntBASIC-0.52□□□□□ -2.49
ERCC2P18074 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.52□□□□□ -2.49
ERCC2P18074 SNORD114-28-201ENST00000363610 72 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 SNORD14C-201ENST00000365382 88 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
ERCC2P18074 AP000676.1-201ENST00000533307 52 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 MIR4636-201ENST00000582271 80 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 AP001180.6-201ENST00000584918 159 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 AC012531.4-201ENST00000616509 177 ntBASIC-0.53□□□□□ -2.49
ERCC2P18074 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 MT-TR-201ENST00000387439 65 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 MIR548U-201ENST00000390728 81 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 SNORD126-201ENST00000459475 77 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 AL590491.3-201ENST00000610731 82 ntBASIC-0.54□□□□□ -2.5
ERCC2P18074 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
ERCC2P18074 SNORD4B-201ENST00000459083 72 ntBASIC-0.55□□□□□ -2.5
ERCC2P18074 MIR3064-201ENST00000581130 66 ntBASIC-0.55□□□□□ -2.5
ERCC2P18074 SNORD114-4-201ENST00000363962 75 ntBASIC-0.56□□□□□ -2.5
ERCC2P18074 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.56□□□□□ -2.5
ERCC2P18074 SNORA49-201ENST00000386157 136 ntBASIC-0.56□□□□□ -2.5
ERCC2P18074 SNORA19.1-201ENST00000410656 129 ntBASIC-0.56□□□□□ -2.5
ERCC2P18074 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.56□□□□□ -2.5
ERCC2P18074 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 RNU6-959P-201ENST00000384671 107 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 MIR9-2-201ENST00000384838 87 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 RNU6-519P-201ENST00000410590 108 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 SNORD42B-201ENST00000458893 67 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 AC104996.3-201ENST00000590718 94 ntBASIC-0.57□□□□□ -2.5
ERCC2P18074 SNORD114-11-201ENST00000363738 75 ntBASIC-0.58□□□□□ -2.5
ERCC2P18074 MIR582-201ENST00000365731 98 ntBASIC-0.58□□□□□ -2.5
ERCC2P18074 RNU6-35P-201ENST00000384530 107 ntBASIC-0.58□□□□□ -2.5
ERCC2P18074 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.58□□□□□ -2.5
ERCC2P18074 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.58□□□□□ -2.5
ERCC2P18074 SCARNA23-201ENST00000516060 130 ntBASIC-0.58□□□□□ -2.5
ERCC2P18074 RNU6-904P-201ENST00000516206 101 ntBASIC-0.58□□□□□ -2.5
ERCC2P18074 SNORA63.2-201ENST00000362603 126 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 SNORD115-25-201ENST00000362619 82 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 MIR548E-201ENST00000408287 88 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 RNA5SP66-201ENST00000517178 101 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 MIR3140-201ENST00000583685 90 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 MIR4493-201ENST00000584016 73 ntBASIC-0.59□□□□□ -2.5
ERCC2P18074 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 RNU6-900P-201ENST00000384498 102 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 SNORD2-201ENST00000459163 69 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 RNA5SP395-201ENST00000516567 118 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 AC145423.2-201ENST00000610631 239 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 MIR8064-201ENST00000612863 90 ntBASIC-0.6□□□□□ -2.51
ERCC2P18074 AC008267.6-201ENST00000441664 139 ntBASIC-0.61□□□□□ -2.51
ERCC2P18074 MIR101-1-201ENST00000362265 75 ntBASIC-0.62□□□□□ -2.51
ERCC2P18074 RNA5SP292-201ENST00000390974 118 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 243.8 ms