Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU7-119P-201ENST00000459279 63 ntBASIC-4.63□□□□□ -3.15
VCANP13611 AP003181.2-201ENST00000528941 181 ntBASIC-4.63□□□□□ -3.15
VCANP13611 Y_RNA.399-201ENST00000383955 105 ntBASIC-4.64□□□□□ -3.15
VCANP13611 RNU6-155P-201ENST00000516347 100 ntBASIC-4.64□□□□□ -3.15
VCANP13611 RNU6-1271P-201ENST00000517049 105 ntBASIC-4.64□□□□□ -3.15
VCANP13611 RNU6-1038P-201ENST00000516516 104 ntBASIC-4.65□□□□□ -3.15
VCANP13611 MTND1P12-201ENST00000455231 147 ntBASIC-4.65□□□□□ -3.15
VCANP13611 RNU6-196P-201ENST00000384315 107 ntBASIC-4.66□□□□□ -3.16
VCANP13611 Y_RNA.345-201ENST00000365384 92 ntBASIC-4.66□□□□□ -3.16
VCANP13611 RNU6-1326P-201ENST00000391262 107 ntBASIC-4.66□□□□□ -3.16
VCANP13611 AL450471.1-201ENST00000447509 127 ntBASIC-4.66□□□□□ -3.16
VCANP13611 RNU6-1108P-201ENST00000516308 104 ntBASIC-4.66□□□□□ -3.16
VCANP13611 MTCO2P30-201ENST00000503662 364 ntBASIC-4.67□□□□□ -3.16
VCANP13611 Y_RNA.706-201ENST00000516933 99 ntBASIC-4.67□□□□□ -3.16
VCANP13611 RNU6-182P-201ENST00000516970 105 ntBASIC-4.67□□□□□ -3.16
VCANP13611 uc_338.11-201ENST00000619132 160 ntBASIC-4.67□□□□□ -3.16
VCANP13611 MIR1-2-201ENST00000384961 85 ntBASIC-4.67□□□□□ -3.16
VCANP13611 SNORD65C-201ENST00000390962 71 ntBASIC-4.68□□□□□ -3.16
VCANP13611 SNORD60.1-201ENST00000362451 73 ntBASIC-4.68□□□□□ -3.16
VCANP13611 SNORD12B-201ENST00000410433 91 ntBASIC-4.68□□□□□ -3.16
VCANP13611 RNU6-1149P-201ENST00000516810 97 ntBASIC-4.68□□□□□ -3.16
VCANP13611 AC138907.4-201ENST00000570107 226 ntBASIC-4.68□□□□□ -3.16
VCANP13611 TIMM9P2-201ENST00000419324 266 ntBASIC-4.69□□□□□ -3.16
VCANP13611 MIR3675-201ENST00000583661 73 ntBASIC-4.69□□□□□ -3.16
VCANP13611 SNORA7.5-201ENST00000410672 110 ntBASIC-4.7□□□□□ -3.16
VCANP13611 RNU6-383P-201ENST00000410864 94 ntBASIC-4.7□□□□□ -3.16
VCANP13611 MIR3942-201ENST00000585264 109 ntBASIC-4.7□□□□□ -3.16
VCANP13611 RNU6-1255P-201ENST00000363434 112 ntBASIC-4.7□□□□□ -3.16
VCANP13611 RNU6-604P-201ENST00000390917 100 ntBASIC-4.7□□□□□ -3.16
VCANP13611 RNU7-164P-201ENST00000459221 62 ntBASIC-4.71□□□□□ -3.16
VCANP13611 RNU6-986P-201ENST00000363133 102 ntBASIC-4.71□□□□□ -3.16
VCANP13611 RNU6-450P-201ENST00000364654 107 ntBASIC-4.71□□□□□ -3.16
VCANP13611 MT-TW-201ENST00000387382 68 ntBASIC-4.71□□□□□ -3.16
VCANP13611 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.71□□□□□ -3.16
VCANP13611 UBE2WP1-201ENST00000362030 340 ntBASIC-4.71□□□□□ -3.16
VCANP13611 RNU5B-1-201ENST00000363286 116 ntBASIC-4.71□□□□□ -3.16
VCANP13611 Y_RNA.194-201ENST00000363985 102 ntBASIC-4.72□□□□□ -3.16
VCANP13611 RNU6-1008P-201ENST00000384160 104 ntBASIC-4.72□□□□□ -3.16
VCANP13611 MIR3118-1-201ENST00000581787 76 ntBASIC-4.72□□□□□ -3.16
VCANP13611 MIR3658-201ENST00000636291 56 ntBASIC-4.72□□□□□ -3.16
VCANP13611 Y_RNA.217-201ENST00000364214 105 ntBASIC-4.72□□□□□ -3.17
VCANP13611 Y_RNA.264-201ENST00000364665 102 ntBASIC-4.72□□□□□ -3.17
VCANP13611 Y_RNA.641-201ENST00000459414 105 ntBASIC-4.72□□□□□ -3.17
VCANP13611 RNU7-110P-201ENST00000516891 62 ntBASIC-4.72□□□□□ -3.17
VCANP13611 RNU6-606P-201ENST00000384721 111 ntBASIC-4.73□□□□□ -3.17
VCANP13611 AC025253.1-201ENST00000613623 543 ntBASIC-4.73□□□□□ -3.17
VCANP13611 MTCO2P24-201ENST00000515611 426 ntBASIC-4.73□□□□□ -3.17
VCANP13611 RNU6-248P-201ENST00000410720 107 ntBASIC-4.74□□□□□ -3.17
VCANP13611 Y_RNA.402-201ENST00000383972 102 ntBASIC-4.74□□□□□ -3.17
VCANP13611 RNU6-542P-201ENST00000516405 103 ntBASIC-4.74□□□□□ -3.17
VCANP13611 MIR4801-201ENST00000582704 82 ntBASIC-4.74□□□□□ -3.17
VCANP13611 Y_RNA.383-201ENST00000383855 97 ntBASIC-4.75□□□□□ -3.17
VCANP13611 RNU7-123P-201ENST00000515911 60 ntBASIC-4.76□□□□□ -3.17
VCANP13611 RNU7-140P-201ENST00000459546 60 ntBASIC-4.76□□□□□ -3.17
VCANP13611 RNU6-1060P-201ENST00000384664 107 ntBASIC-4.76□□□□□ -3.17
VCANP13611 RNU6-1329P-201ENST00000365664 107 ntBASIC-4.77□□□□□ -3.17
VCANP13611 AC083798.1-201ENST00000472671 131 ntBASIC-4.78□□□□□ -3.17
VCANP13611 AC022079.1-201ENST00000621546 602 ntBASIC-4.78□□□□□ -3.17
VCANP13611 RNU6-662P-201ENST00000384253 104 ntBASIC-4.78□□□□□ -3.17
VCANP13611 AL442128.1-201ENST00000615151 90 ntBASIC-4.78□□□□□ -3.17
VCANP13611 RNU6-1205P-201ENST00000363625 106 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.405-201ENST00000383979 100 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.451-201ENST00000384200 100 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.524-201ENST00000384564 100 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.561-201ENST00000384694 100 ntBASIC-4.78□□□□□ -3.18
VCANP13611 MIR1284-201ENST00000408337 120 ntBASIC-4.78□□□□□ -3.18
VCANP13611 RNU6-892P-201ENST00000410335 99 ntBASIC-4.78□□□□□ -3.18
VCANP13611 RNU7-6P-201ENST00000516845 62 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.773-201ENST00000607168 90 ntBASIC-4.78□□□□□ -3.18
VCANP13611 Y_RNA.544-201ENST00000384650 113 ntBASIC-4.79□□□□□ -3.18
VCANP13611 RNU6-408P-201ENST00000515910 100 ntBASIC-4.79□□□□□ -3.18
VCANP13611 RNU6-537P-201ENST00000517277 103 ntBASIC-4.79□□□□□ -3.18
VCANP13611 AC100814.1-201ENST00000606963 623 ntBASIC-4.79□□□□□ -3.18
VCANP13611 MIR367-201ENST00000362299 68 ntBASIC-4.79□□□□□ -3.18
VCANP13611 RNU6-308P-201ENST00000390957 107 ntBASIC-4.8□□□□□ -3.18
VCANP13611 Y_RNA.557-201ENST00000384680 107 ntBASIC-4.8□□□□□ -3.18
VCANP13611 Y_RNA.605-201ENST00000410577 105 ntBASIC-4.81□□□□□ -3.18
VCANP13611 U6.92-201ENST00000636464 89 ntBASIC-4.81□□□□□ -3.18
VCANP13611 Y_RNA.192-201ENST00000363977 102 ntBASIC-4.81□□□□□ -3.18
VCANP13611 RNU6-1299P-201ENST00000516316 100 ntBASIC-4.81□□□□□ -3.18
VCANP13611 RNU6-879P-201ENST00000364328 108 ntBASIC-4.82□□□□□ -3.18
VCANP13611 SNORD27.1-201ENST00000516319 72 ntBASIC-4.82□□□□□ -3.18
VCANP13611 MIR624-201ENST00000385217 97 ntBASIC-4.82□□□□□ -3.18
VCANP13611 RNU6-1213P-201ENST00000517075 94 ntBASIC-4.82□□□□□ -3.18
VCANP13611 MIR8053-201ENST00000613344 75 ntBASIC-4.82□□□□□ -3.18
VCANP13611 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-4.83□□□□□ -3.18
VCANP13611 MTCO2P29-201ENST00000465212 189 ntBASIC-4.83□□□□□ -3.18
VCANP13611 RNU7-167P-201ENST00000459160 62 ntBASIC-4.83□□□□□ -3.18
VCANP13611 RNU6-120P-201ENST00000516077 103 ntBASIC-4.83□□□□□ -3.18
VCANP13611 Y_RNA.106-201ENST00000363189 100 ntBASIC-4.84□□□□□ -3.18
VCANP13611 MIR548AI-201ENST00000579940 88 ntBASIC-4.84□□□□□ -3.18
VCANP13611 MIR759-201ENST00000390224 91 ntBASIC-4.84□□□□□ -3.18
VCANP13611 RNU6-764P-201ENST00000516396 105 ntBASIC-4.85□□□□□ -3.19
VCANP13611 SNORD56.4-201ENST00000363883 71 ntBASIC-4.85□□□□□ -3.19
VCANP13611 RNU6-409P-201ENST00000384114 104 ntBASIC-4.85□□□□□ -3.19
VCANP13611 Y_RNA.163-201ENST00000363702 113 ntBASIC-4.86□□□□□ -3.19
VCANP13611 Y_RNA.301-201ENST00000364990 103 ntBASIC-4.86□□□□□ -3.19
VCANP13611 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-4.86□□□□□ -3.19
VCANP13611 SNORD113.1-201ENST00000363280 73 ntBASIC-4.87□□□□□ -3.19
VCANP13611 RNU4-1-201ENST00000363925 141 ntBASIC-4.87□□□□□ -3.19
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms