Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-182P-201ENST00000516970 105 ntBASIC-0.58□□□□□ -2.5
CD74P04233 MTND5P41-201ENST00000517498 206 ntBASIC-0.58□□□□□ -2.5
CD74P04233 AL353621.2-201ENST00000605340 133 ntBASIC-0.58□□□□□ -2.5
CD74P04233 AC025521.1-201ENST00000621624 286 ntBASIC-0.58□□□□□ -2.5
CD74P04233 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.59□□□□□ -2.5
CD74P04233 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.59□□□□□ -2.5
CD74P04233 RNU6-54P-201ENST00000365563 107 ntBASIC-0.59□□□□□ -2.5
CD74P04233 RNU6-30P-201ENST00000384561 107 ntBASIC-0.59□□□□□ -2.5
CD74P04233 MT-TG-201ENST00000387429 68 ntBASIC-0.59□□□□□ -2.5
CD74P04233 snoU13.13-201ENST00000458842 104 ntBASIC-0.59□□□□□ -2.5
CD74P04233 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.59□□□□□ -2.5
CD74P04233 AC093726.3-201ENST00000637588 150 ntBASIC-0.59□□□□□ -2.5
CD74P04233 SNORD115-25-201ENST00000362619 82 ntBASIC-0.6□□□□□ -2.51
CD74P04233 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.6□□□□□ -2.51
CD74P04233 RNU6-900P-201ENST00000384498 102 ntBASIC-0.6□□□□□ -2.51
CD74P04233 MIR577-201ENST00000385196 96 ntBASIC-0.6□□□□□ -2.51
CD74P04233 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.6□□□□□ -2.51
CD74P04233 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.6□□□□□ -2.51
CD74P04233 RNU6-719P-201ENST00000516671 104 ntBASIC-0.6□□□□□ -2.51
CD74P04233 MIR548AX-201ENST00000580117 73 ntBASIC-0.6□□□□□ -2.51
CD74P04233 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.6□□□□□ -2.51
CD74P04233 MIR4536-1-201ENST00000583537 88 ntBASIC-0.6□□□□□ -2.51
CD74P04233 MIR4719-201ENST00000585233 84 ntBASIC-0.6□□□□□ -2.51
CD74P04233 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.61□□□□□ -2.51
CD74P04233 MIR204-201ENST00000385200 110 ntBASIC-0.61□□□□□ -2.51
CD74P04233 RNU6-721P-201ENST00000410155 105 ntBASIC-0.61□□□□□ -2.51
CD74P04233 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.61□□□□□ -2.51
CD74P04233 RNU6-75P-201ENST00000515944 104 ntBASIC-0.61□□□□□ -2.51
CD74P04233 RNU6-65P-201ENST00000516332 98 ntBASIC-0.61□□□□□ -2.51
CD74P04233 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.61□□□□□ -2.51
CD74P04233 MIR5704-201ENST00000584029 77 ntBASIC-0.61□□□□□ -2.51
CD74P04233 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.62□□□□□ -2.51
CD74P04233 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.62□□□□□ -2.51
CD74P04233 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.62□□□□□ -2.51
CD74P04233 MIR582-201ENST00000365731 98 ntBASIC-0.62□□□□□ -2.51
CD74P04233 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
CD74P04233 MIR8068-201ENST00000618032 68 ntBASIC-0.62□□□□□ -2.51
CD74P04233 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.62□□□□□ -2.51
CD74P04233 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
CD74P04233 MTND4LP9-201ENST00000427694 174 ntBASIC-0.63□□□□□ -2.51
CD74P04233 RNU6-772P-201ENST00000516042 105 ntBASIC-0.63□□□□□ -2.51
CD74P04233 MIR4694-201ENST00000578534 80 ntBASIC-0.63□□□□□ -2.51
CD74P04233 AL035470.1-201ENST00000622571 220 ntBASIC-0.63□□□□□ -2.51
CD74P04233 RNU6-832P-201ENST00000363319 107 ntBASIC-0.64□□□□□ -2.51
CD74P04233 RNU6-886P-201ENST00000384319 105 ntBASIC-0.64□□□□□ -2.51
CD74P04233 RNU4-63P-201ENST00000411313 118 ntBASIC-0.64□□□□□ -2.51
CD74P04233 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.64□□□□□ -2.51
CD74P04233 AL157777.2-201ENST00000258070 137 ntBASIC-0.65□□□□□ -2.51
CD74P04233 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.65□□□□□ -2.51
CD74P04233 U3.27-201ENST00000391237 200 ntBASIC-0.65□□□□□ -2.51
CD74P04233 MIR548E-201ENST00000408287 88 ntBASIC-0.65□□□□□ -2.51
CD74P04233 SNORD42B-201ENST00000458893 67 ntBASIC-0.65□□□□□ -2.51
CD74P04233 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.65□□□□□ -2.51
CD74P04233 RNU7-55P-201ENST00000459426 62 ntBASIC-0.65□□□□□ -2.51
CD74P04233 AL513043.2-201ENST00000573941 143 ntBASIC-0.65□□□□□ -2.51
CD74P04233 MIR6851-201ENST00000617060 67 ntBASIC-0.65□□□□□ -2.51
CD74P04233 AL627230.5-201ENST00000619807 58 ntBASIC-0.65□□□□□ -2.51
CD74P04233 SNORD114-4-201ENST00000363962 75 ntBASIC-0.66□□□□□ -2.52
CD74P04233 SNORD50.2-201ENST00000365465 70 ntBASIC-0.66□□□□□ -2.52
CD74P04233 RNU6-476P-201ENST00000384726 107 ntBASIC-0.66□□□□□ -2.52
CD74P04233 RNY1P7-201ENST00000384743 110 ntBASIC-0.66□□□□□ -2.52
CD74P04233 RNY3P2-201ENST00000362918 102 ntBASIC-0.67□□□□□ -2.52
CD74P04233 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.67□□□□□ -2.52
CD74P04233 SNORA40-201ENST00000388090 126 ntBASIC-0.67□□□□□ -2.52
CD74P04233 RNU7-85P-201ENST00000458851 63 ntBASIC-0.67□□□□□ -2.52
CD74P04233 RNU7-107P-201ENST00000459121 61 ntBASIC-0.67□□□□□ -2.52
CD74P04233 SNORD2-201ENST00000459163 69 ntBASIC-0.67□□□□□ -2.52
CD74P04233 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.67□□□□□ -2.52
CD74P04233 RNA5SP67-201ENST00000516422 131 ntBASIC-0.67□□□□□ -2.52
CD74P04233 SNORA40.17-201ENST00000517256 115 ntBASIC-0.67□□□□□ -2.52
CD74P04233 AC068339.1-201ENST00000526965 141 ntBASIC-0.67□□□□□ -2.52
CD74P04233 MIR3613-201ENST00000579844 87 ntBASIC-0.67□□□□□ -2.52
CD74P04233 MIR3681-201ENST00000580089 72 ntBASIC-0.67□□□□□ -2.52
CD74P04233 MIR409-201ENST00000362237 79 ntBASIC-0.68□□□□□ -2.52
CD74P04233 SNORD114-25-201ENST00000363742 72 ntBASIC-0.68□□□□□ -2.52
CD74P04233 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
CD74P04233 AL500527.2-201ENST00000454105 95 ntBASIC-0.68□□□□□ -2.52
CD74P04233 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.68□□□□□ -2.52
CD74P04233 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.69□□□□□ -2.52
CD74P04233 RNU6-132P-201ENST00000383863 107 ntBASIC-0.69□□□□□ -2.52
CD74P04233 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.69□□□□□ -2.52
CD74P04233 MIR548A1-201ENST00000385041 97 ntBASIC-0.69□□□□□ -2.52
CD74P04233 RNU6-257P-201ENST00000410238 98 ntBASIC-0.69□□□□□ -2.52
CD74P04233 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.69□□□□□ -2.52
CD74P04233 MIR4679-2-201ENST00000578358 77 ntBASIC-0.69□□□□□ -2.52
CD74P04233 RNU6-905P-201ENST00000384434 107 ntBASIC-0.7□□□□□ -2.52
CD74P04233 MIR196A1-201ENST00000388006 70 ntBASIC-0.7□□□□□ -2.52
CD74P04233 RNU7-200P-201ENST00000516105 62 ntBASIC-0.7□□□□□ -2.52
CD74P04233 SNORD22.1-201ENST00000516331 125 ntBASIC-0.7□□□□□ -2.52
CD74P04233 RNU6-881P-201ENST00000516813 102 ntBASIC-0.7□□□□□ -2.52
CD74P04233 MIR3140-201ENST00000583685 90 ntBASIC-0.7□□□□□ -2.52
CD74P04233 AC103810.7-201ENST00000607821 91 ntBASIC-0.7□□□□□ -2.52
CD74P04233 RNU6-502P-201ENST00000362419 108 ntBASIC-0.71□□□□□ -2.52
CD74P04233 SNORD45B-201ENST00000364617 72 ntBASIC-0.71□□□□□ -2.52
CD74P04233 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.71□□□□□ -2.52
CD74P04233 MIR517B-201ENST00000385102 67 ntBASIC-0.71□□□□□ -2.52
CD74P04233 AC021146.6-201ENST00000514659 117 ntBASIC-0.71□□□□□ -2.52
CD74P04233 RNU6-346P-201ENST00000516288 111 ntBASIC-0.71□□□□□ -2.52
CD74P04233 RNU6-971P-201ENST00000516920 106 ntBASIC-0.71□□□□□ -2.52
CD74P04233 MIR5009-201ENST00000578736 100 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms